Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8207: 16575 - K09578 PIN1 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, at 672113 to 672814 16575 mRNA_8208: 16576 - BLAST putative Rho guanyl-nucleotide exchange factor [Rhodo..., at 672999 to 674159 16576 mRNA_8209: 16577 - K17618 UBLCP1 ubiquitin-like domain-containing CTD phosphatase 1, at 674405 to 676070 16577 mRNA_8210: 16578 - BLAST WetA [Penicillium camemberti], at 676267 to 678027 16578 mRNA_8211: 16579 - K02894 RP-L23e, RPL23 large subunit ribosomal protein L23e, at 679410 to 680572 16579
Group Condition mRNA_8207 mRNA_8208 mRNA_8209 mRNA_8210 mRNA_8211
16575
16576
16577
16578
16579
ypd buoyancy 40 hrs No Buoyancy Separation 0.4   -2.4 0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   -0.6 -0.2  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7   -0.4 0.5  
growth on ricinoleic acid YNB Ricinoleic Acid -0.6   0.1 0.1  
facs on lipid accumulation Sorted High BODIPY Gate -0.6   -0.2 0.5  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0   -0.4 0.3  
growth on ricinoleic acid YNB Glucose -0.4   0.4 -0.1  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1   -0.3 0.0  
growth on oleic acid YNB Oleic Acid -0.2   -0.0 0.1  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2   -0.2 0.4  
ypd buoyancy 40 hrs Median Buoyancy 0.1   0.1 -0.3  
growth on oleic acid YNB Glucose -0.0   -0.0 0.2  
auxotrophy YNB Glucose 75mM Methionine -0.2   0.3 0.1  
ypd buoyancy 40 hrs High Buoyancy 0.3   -0.1 0.0  
auxotrophy YNB Glucose -0.2   0.4 0.4  
ypd buoyancy 40 hrs Low Buoyancy 0.5   0.0 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.1   0.3 0.6  
growth on ypd YPD 0.2   0.5 0.1  
auxotrophy YNB Glucose 75mM Arginine 0.0   0.5 0.5  
auxotrophy Dropout Complete 0.3   0.6 0.2  
facs on lipid accumulation Sorted Low BODIPY Gate 0.1   0.4 0.7  
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