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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8184: 16552 - K00988 APA1_2 ATP adenylyltransferase, at 616744 to 618050
16552
mRNA_8185: 16553 - K02359 EGH egghead protein (zeste-white 4 protein), at 618810 to 622514
16553
mRNA_8186: 16554 - Hypothetical Protein, at 622930 to 623583
16554
mRNA_8187: 16555 - K10949 KDELR ER lumen protein retaining receptor, at 624425 to 625437
16555
mRNA_8188: 16556 - K05012 CLCN3_4_5 chloride channel 3/4/5, at 625723 to 629622
16556
Group
Condition
mRNA_8184
mRNA_8185
mRNA_8186
mRNA_8187
mRNA_8188
16552
16553
16554
16555
16556
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
0.5
-1.0
facs on lipid accumulation
Sorted High BODIPY Gate
-0.4
0.5
-0.5
growth on oleic acid
YNB Oleic Acid
-0.2
0.0
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
-0.1
0.4
growth on ypd
YPD
-0.3
0.3
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.0
-0.3
0.6
auxotrophy
YNB Glucose
-0.1
0.2
0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.2
0.2
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.2
0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.3
-0.0
0.3
ypd buoyancy
40 hrs No Buoyancy Separation
0.2
-0.5
0.9
growth on oleic acid
YNB Glucose
0.2
0.1
0.3
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.0
0.5
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.2
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.5
0.6
auxotrophy
Dropout Complete
0.2
0.1
0.6
growth on ricinoleic acid
YNB Glucose
0.0
0.1
0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
0.4
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.5
-0.1
0.8
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
0.3
1.0
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