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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8175: 16543 - K15303 AKR7 aflatoxin B1 aldehyde reductase, at 600954 to 602417
16543
mRNA_8176: 16544 - Interpro DNA replication regulator SLD3, at 602713 to 604782
16544
mRNA_8177: 16545 - Hypothetical Protein, at 605044 to 605937
16545
mRNA_8178: 16546 - Hypothetical Protein, at 606066 to 607018
16546
mRNA_8179: 16547 - K20705 DNMBP, ARHGEF36, TUBA dynamin-binding protein, at 608885 to 612908
16547
Group
Condition
mRNA_8175
mRNA_8176
mRNA_8177
mRNA_8178
mRNA_8179
16543
16544
16545
16546
16547
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
-1.3
-0.7
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.3
-0.5
-0.4
growth on oleic acid
YNB Oleic Acid
-0.1
-0.9
-0.2
ypd buoyancy
40 hrs High Buoyancy
-0.5
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.4
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.6
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.0
-0.8
-0.1
ypd buoyancy
40 hrs Low Buoyancy
-0.8
0.1
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.2
-0.7
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.0
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.1
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.2
0.0
growth on oleic acid
YNB Glucose
0.4
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.3
-0.4
auxotrophy
YNB Glucose
0.5
0.2
-0.3
auxotrophy
Dropout Complete
0.3
0.5
-0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.1
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.4
0.3
-0.2
growth on ypd
YPD
0.2
0.8
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.2
0.5
-0.1
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