Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8171: 16539 - HMMPfam-DnaJ domain-PF00226,ProSiteProfiles-dnaJ domain profile.-PS50076,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 587656 to 589364 16539 mRNA_8172: 16540 - K17592 SACS sacsin, at 590465 to 596519 16540 mRNA_8173: 16541 - HMMPfam-Glutathione-dependent formaldehyde-activating enzyme-PF04828,SUPERFAMILY--SSF51316, at 596757 to 597514 16541 mRNA_8174: 16542 - K00645 fabD [acyl-carrier-protein] S-malonyltransferase, at 598873 to 600672 16542 mRNA_8175: 16543 - K15303 AKR7 aflatoxin B1 aldehyde reductase, at 600954 to 602417 16543
Group Condition mRNA_8171 mRNA_8172 mRNA_8173 mRNA_8174 mRNA_8175
16539
16540
16541
16542
16543
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.9 -2.0 -2.4  
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.2 -3.1 -0.3  
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 -1.4 -0.9  
growth on ypd YPD 0.2 -0.2 -0.9 -0.7  
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.3 -0.3 -1.1  
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1 0.1 -1.3  
growth on ricinoleic acid YNB Glucose -0.7 0.2 -0.2 -0.4  
auxotrophy YNB Glucose 0.0 -0.0 -0.1 -0.4  
ypd buoyancy 40 hrs Low Buoyancy -0.4 0.1 -0.9 0.7  
ypd buoyancy 40 hrs High Buoyancy 0.0 0.0 -1.4 0.9  
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.0 -0.3 0.1  
growth on oleic acid YNB Glucose -0.2 0.0 0.4 -0.6  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.2 -0.5 -0.3  
auxotrophy YNB Glucose 75mM Methionine 0.0 0.2 0.1 -0.6  
auxotrophy YNB Glucose 75mM Arginine 0.1 0.1 -0.3 -0.2  
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.1 0.0 -0.4  
growth on oleic acid YNB Oleic Acid 0.4 -0.1 0.3 -0.2  
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.4 0.9  
auxotrophy Dropout Complete 0.2 0.3 0.2 -0.0  
facs on lipid accumulation Sorted High BODIPY Gate 0.8 0.1 0.2 -0.5  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.4 0.2 0.2 0.2  
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