Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8167: 16535 - K04350 RASGRP1 RAS guanyl-releasing protein 1, at 574672 to 578875 16535 mRNA_8168: 16536 - BLAST PQ-loop-domain-containing protein [Dichomitus squ..., at 580110 to 581600 16536 mRNA_8169: 16537 - HMMPfam-Anaphase-promoting complex, cyclosome, subunit 4-PF12896, at 582440 to 584866 16537 mRNA_8170: 16538 - BLAST PQ-loop-domain-containing protein [Calocera cornea HH..., at 585766 to 587530 16538 mRNA_8171: 16539 - HMMPfam-DnaJ domain-PF00226,ProSiteProfiles-dnaJ domain profile.-PS50076,SMART-DnaJ molecular chaperone homology domain-SM00271,SUPERFAMILY--SSF46565, at 587656 to 589364 16539
Group Condition mRNA_8167 mRNA_8168 mRNA_8169 mRNA_8170 mRNA_8171
16535
16536
16537
16538
16539
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.0   -0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.3   0.0 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.1   -0.1 -0.1
growth on ricinoleic acid YNB Glucose 0.2 -0.1   0.5 -0.7
growth on oleic acid YNB Glucose 0.0 0.1   0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.0   -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.1   0.3 -0.2
auxotrophy YNB Glucose 0.1 -0.1   0.2 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2   -0.2 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 -0.0   0.5 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.2   0.1 0.3
growth on oleic acid YNB Oleic Acid 0.0 -0.0   0.0 0.4
auxotrophy Dropout Complete 0.2 -0.1   0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2   0.2 0.0
auxotrophy YNB Glucose 75mM Arginine 0.1 0.0   0.2 0.1
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1   0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 0.1   0.2 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.3   -0.4 0.6
growth on ypd YPD 0.1 0.3   0.0 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.3   0.2 0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.2 0.1   -0.0 0.8
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