Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8164: 16532 - Hypothetical Protein, at 564616 to 567626 16532 mRNA_8165: 16533 - HMMPfam-Saccharopine dehydrogenase-PF03435,SUPERFAMILY--SSF51735, at 569404 to 570854 16533 mRNA_8166: 16534 - BLAST receptor-activated Ca2+-permeable cation channel [Aur..., at 571164 to 574503 16534 mRNA_8167: 16535 - K04350 RASGRP1 RAS guanyl-releasing protein 1, at 574672 to 578875 16535 mRNA_8168: 16536 - BLAST PQ-loop-domain-containing protein [Dichomitus squ..., at 580110 to 581600 16536
Group Condition mRNA_8164 mRNA_8165 mRNA_8166 mRNA_8167 mRNA_8168
16532
16533
16534
16535
16536
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.9 -0.2 -0.0 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.6 -0.1 -0.2 0.2
auxotrophy YNB Glucose 75mM Arginine 0.0 -0.6 0.1 0.1 0.0
auxotrophy YNB Glucose -0.1 -0.4 0.1 0.1 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.0 -0.3 -0.1 0.0 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1 0.3 -0.1 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.3 0.0 0.0 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.3 -0.0 -0.3 0.1 0.1
growth on oleic acid YNB Glucose 0.3 -0.4 0.2 0.0 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.0 0.1 -0.0
growth on ricinoleic acid YNB Glucose 0.4 -0.0 -0.1 0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -0.2 0.3 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.2 -0.0 0.2 -0.0
auxotrophy Dropout Complete 0.1 -0.1 0.4 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 0.3 0.3 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.3 -0.2 -0.1 0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.0 0.1 0.2 -0.0
growth on oleic acid YNB Oleic Acid 0.6 0.0 -0.0 0.0 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.1 0.3 0.2 0.1
growth on ypd YPD -0.1 0.5 0.3 0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 0.4 0.2 0.3
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