Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8162: 16530 - K01288 KEX1 carboxypeptidase D, at 560914 to 563494 16530 mRNA_8163: 16531 - HMMPfam-Domain of unknown function (DUF4505)-PF14956, at 563626 to 564400 16531 mRNA_8164: 16532 - Hypothetical Protein, at 564616 to 567626 16532 mRNA_8165: 16533 - HMMPfam-Saccharopine dehydrogenase-PF03435,SUPERFAMILY--SSF51735, at 569404 to 570854 16533 mRNA_8166: 16534 - BLAST receptor-activated Ca2+-permeable cation channel [Aur..., at 571164 to 574503 16534
Group Condition mRNA_8162 mRNA_8163 mRNA_8164 mRNA_8165 mRNA_8166
16530
16531
16532
16533
16534
ypd buoyancy 40 hrs No Buoyancy Separation 0.3 -0.3 0.1 -1.9 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.4 -0.0 -0.4 -0.6 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.3 -0.1 0.0 -0.6 0.1
auxotrophy YNB Glucose -0.3 -0.0 -0.1 -0.4 0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 -0.1 -0.1 -0.2 0.3
growth on ricinoleic acid YNB Ricinoleic Acid 0.0 -0.5 0.3 -0.0 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.1 0.0 0.0 -0.3 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.6 0.4 -0.2 -0.0
growth on ricinoleic acid YNB Glucose -0.1 -0.4 0.4 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.2 -0.1 -0.3 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1 -0.1 -0.1 -0.1 0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 0.3 -0.3 -0.1 0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 0.3 -0.0 0.1
growth on oleic acid YNB Glucose -0.0 0.2 0.3 -0.4 0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.3 0.2 0.3 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 0.1 0.1 0.0
auxotrophy Dropout Complete -0.1 0.2 0.1 -0.1 0.4
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.6 0.0 -0.0
growth on ypd YPD -0.0 0.1 -0.1 0.5 0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.0 0.6 0.1 -0.1 0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.0 0.5 0.1 0.3 0.4
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