Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8160: 16528 - K01873 VARS, valS valyl-tRNA synthetase, at 555144 to 559347 16528 mRNA_8161: 16529 - BLAST Actin cytoskeleton-regulatory complex protein pan1 [R..., at 559527 to 560747 16529 mRNA_8162: 16530 - K01288 KEX1 carboxypeptidase D, at 560914 to 563494 16530 mRNA_8163: 16531 - HMMPfam-Domain of unknown function (DUF4505)-PF14956, at 563626 to 564400 16531 mRNA_8164: 16532 - Hypothetical Protein, at 564616 to 567626 16532
Group Condition mRNA_8160 mRNA_8161 mRNA_8162 mRNA_8163 mRNA_8164
16528
16529
16530
16531
16532
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.1 -0.4 -0.0 -0.4
growth on ricinoleic acid YNB Glucose   0.0 -0.1 -0.4 0.4
ypd buoyancy 40 hrs No Buoyancy Separation   -0.2 0.3 -0.3 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy   -0.0 -0.2 0.3 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid   -0.0 0.0 -0.5 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.3 -0.3 0.3 0.2
auxotrophy YNB Glucose 75mM Methionine   0.5 -0.3 -0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy   -0.2 -0.0 -0.1 0.3
auxotrophy YNB Glucose 75mM Arginine   0.4 -0.3 -0.1 0.0
auxotrophy YNB Glucose   0.4 -0.3 -0.0 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.0 -0.1 0.2 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate   0.4 -0.1 -0.1 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid   0.2 0.0 -0.6 0.4
ypd buoyancy 40 hrs High Buoyancy   0.1 -0.1 0.0 0.0
growth on ypd YPD   0.2 -0.0 0.1 -0.1
ypd buoyancy 40 hrs Median Buoyancy   0.0 0.0 0.2 0.1
growth on oleic acid YNB Glucose   0.2 -0.0 0.2 0.3
facs on lipid accumulation Sorted High BODIPY Gate   0.1 -0.0 0.6 0.1
facs on lipid accumulation Sorted No BODIPY Gate   0.2 -0.0 0.5 0.1
auxotrophy Dropout Complete   0.8 -0.1 0.2 0.1
growth on oleic acid YNB Oleic Acid   0.2 0.1 0.1 0.6
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