Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549657 to 551853 16525 mRNA_8158: 16526 - K14004 SEC13 protein transport protein SEC13, at 552046 to 553498 16526 mRNA_8159: 16527 - K17607 TIPRL, TIP41 type 2A phosphatase activator TIP41, at 553684 to 555009 16527 mRNA_8160: 16528 - K01873 VARS, valS valyl-tRNA synthetase, at 555144 to 559347 16528 mRNA_8161: 16529 - BLAST Actin cytoskeleton-regulatory complex protein pan1 [R..., at 559527 to 560747 16529
Group Condition mRNA_8157 mRNA_8158 mRNA_8159 mRNA_8160 mRNA_8161
16525
16526
16527
16528
16529
facs on lipid accumulation Sorted Low BODIPY Gate -0.5   -1.3   0.4
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   -0.3   -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2   -0.2   -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2   -0.1   -0.3
ypd buoyancy 40 hrs Low Buoyancy -0.0   -0.0   -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1   -0.3   0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -0.1   0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1   -0.1   0.2
ypd buoyancy 40 hrs Median Buoyancy 0.0   0.3   0.0
ypd buoyancy 40 hrs High Buoyancy -0.0   0.3   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2   0.3   0.0
growth on ricinoleic acid YNB Glucose -0.0   0.6   0.0
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1   0.4   0.2
growth on ypd YPD 0.1   0.5   0.2
auxotrophy YNB Glucose 75mM Arginine -0.1   0.7   0.4
growth on ricinoleic acid YNB Ricinoleic Acid 0.1   1.0   -0.0
growth on oleic acid YNB Glucose 0.0   0.9   0.2
growth on oleic acid YNB Oleic Acid 0.0   1.1   0.2
auxotrophy YNB Glucose 75mM Methionine 0.0   0.9   0.5
auxotrophy YNB Glucose -0.1   1.2   0.4
auxotrophy Dropout Complete -0.0   1.1   0.8
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