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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549657 to 551853
16525
mRNA_8158: 16526 - K14004 SEC13 protein transport protein SEC13, at 552046 to 553498
16526
mRNA_8159: 16527 - K17607 TIPRL, TIP41 type 2A phosphatase activator TIP41, at 553684 to 555009
16527
mRNA_8160: 16528 - K01873 VARS, valS valyl-tRNA synthetase, at 555144 to 559347
16528
mRNA_8161: 16529 - BLAST Actin cytoskeleton-regulatory complex protein pan1 [R..., at 559527 to 560747
16529
Group
Condition
mRNA_8157
mRNA_8158
mRNA_8159
mRNA_8160
mRNA_8161
16525
16526
16527
16528
16529
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-1.3
0.4
ypd buoyancy
40 hrs No Buoyancy Separation
-0.2
-0.3
-0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.2
-0.2
-0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.2
-0.1
-0.3
ypd buoyancy
40 hrs Low Buoyancy
-0.0
-0.0
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
0.1
-0.3
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.1
-0.1
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
-0.1
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.0
0.3
0.0
ypd buoyancy
40 hrs High Buoyancy
-0.0
0.3
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.2
0.3
0.0
growth on ricinoleic acid
YNB Glucose
-0.0
0.6
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
0.4
0.2
growth on ypd
YPD
0.1
0.5
0.2
auxotrophy
YNB Glucose 75mM Arginine
-0.1
0.7
0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
1.0
-0.0
growth on oleic acid
YNB Glucose
0.0
0.9
0.2
growth on oleic acid
YNB Oleic Acid
0.0
1.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.9
0.5
auxotrophy
YNB Glucose
-0.1
1.2
0.4
auxotrophy
Dropout Complete
-0.0
1.1
0.8
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