Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8154: 16522 - HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179, at 539197 to 540895 16522 mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541110 to 545271 16523 mRNA_8156: 16524 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 545872 to 548769 16524 mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549657 to 551853 16525 mRNA_8158: 16526 - K14004 SEC13 protein transport protein SEC13, at 552046 to 553498 16526
Group Condition mRNA_8154 mRNA_8155 mRNA_8156 mRNA_8157 mRNA_8158
16522
16523
16524
16525
16526
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.6 -1.3 -0.2  
auxotrophy YNB Glucose 0.1 -0.9 -1.3 -0.1  
growth on ricinoleic acid YNB Glucose 0.0 -0.8 -0.9 -0.0  
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 1.5 -2.2 -0.5  
auxotrophy Dropout Complete -0.1 -0.4 -0.8 -0.0  
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.7 -0.7 -0.1  
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.5 -1.0 0.0  
growth on ricinoleic acid YNB Methylricinoleic Acid 0.0 -0.5 -0.4 0.1  
growth on oleic acid YNB Glucose 0.3 -0.4 -0.7 0.0  
growth on oleic acid YNB Oleic Acid 0.1 -0.6 -0.3 0.0  
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -1.1 0.2  
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.4 0.1 0.1  
growth on ypd YPD 0.0 -0.5 0.0 0.1  
facs on lipid accumulation Sorted No BODIPY Gate -0.2 0.4 -0.7 0.1  
ypd buoyancy 40 hrs High Buoyancy 0.1 0.1 -0.3 -0.0  
facs on lipid accumulation Sorted High BODIPY Gate -0.3 0.5 -0.3 0.1  
ypd buoyancy 40 hrs Median Buoyancy 0.1 0.1 0.1 0.0  
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.0 0.2 -0.0  
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.2 0.3 -0.2  
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.3 0.4 0.1  
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.6 1.8 0.2  
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