Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8153: 16521 - HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626, at 537692 to 539063 16521 mRNA_8154: 16522 - HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179, at 539197 to 540895 16522 mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541110 to 545271 16523 mRNA_8156: 16524 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 545872 to 548769 16524 mRNA_8157: 16525 - ProSiteProfiles-DOMON domain profile.-PS50836,ProSiteProfiles-Cytochrome b561 domain profile.-PS50939,SMART-Cytochrome b-561 / ferric reductase transmembrane domain.-SM00665,SUPERFAMILY--SSF49344, at 549657 to 551853 16525
Group Condition mRNA_8153 mRNA_8154 mRNA_8155 mRNA_8156 mRNA_8157
16521
16522
16523
16524
16525
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.4 -0.1 -0.6 -1.3 -0.2
auxotrophy YNB Glucose -0.1 0.1 -0.9 -1.3 -0.1
growth on ricinoleic acid YNB Glucose -0.3 0.0 -0.8 -0.9 -0.0
auxotrophy YNB Glucose 75mM Arginine -0.1 0.1 -0.7 -0.7 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.2 1.5 -2.2 -0.5
auxotrophy Dropout Complete 0.1 -0.1 -0.4 -0.8 -0.0
auxotrophy YNB Glucose 75mM Methionine 0.1 0.1 -0.5 -1.0 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.0 -0.5 -0.4 0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.2 -0.4 0.1 0.1
growth on oleic acid YNB Glucose 0.1 0.3 -0.4 -0.7 0.0
growth on oleic acid YNB Oleic Acid 0.1 0.1 -0.6 -0.3 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.1 0.3 -1.1 0.2
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.2 0.4 -0.7 0.1
growth on ypd YPD 0.2 0.0 -0.5 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.3 0.1 0.1 -0.3 -0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.3 0.5 -0.3 0.1
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 0.1 0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 0.0 0.2 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.1 0.3 0.4 0.1
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 0.1 0.2 0.3 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.1 0.6 1.8 0.2
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