Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8151: 16519 - K19846 SPA2 protein SPA2, at 532598 to 536503 16519 mRNA_8152: 16520 - KOG2944 Glyoxalase, at 536656 to 537504 16520 mRNA_8153: 16521 - HMMPfam-Chalcone-flavanone isomerase-PF02431,SUPERFAMILY--SSF54626, at 537692 to 539063 16521 mRNA_8154: 16522 - HMMPfam-Ketopantoate reductase PanE/ApbA-PF02558,HMMPfam-Ketopantoate reductase PanE/ApbA C terminal-PF08546,SUPERFAMILY--SSF48179, at 539197 to 540895 16522 mRNA_8155: 16523 - K15361 WDR48, UAF1 WD repeat-containing protein 48, at 541110 to 545271 16523
Group Condition mRNA_8151 mRNA_8152 mRNA_8153 mRNA_8154 mRNA_8155
16519
16520
16521
16522
16523
ypd buoyancy 40 hrs No Buoyancy Separation -0.9 -2.0 -0.0 0.1 0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.2 -0.4 -0.1 -0.6
growth on ricinoleic acid YNB Glucose 0.6 -0.1 -0.3 0.0 -0.8
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.3 -0.1 0.1 -0.7
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 -0.1 -0.3 -0.1 0.3
auxotrophy YNB Glucose 0.7 0.1 -0.1 0.1 -0.9
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.1 0.1 0.1
growth on ypd YPD 0.1 0.1 0.2 0.0 -0.5
growth on ricinoleic acid YNB Ricinoleic Acid 1.3 -0.2 -0.3 -0.2 -0.4
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.4 0.3 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine 0.7 -0.2 0.1 0.1 -0.5
auxotrophy Dropout Complete 0.6 0.1 0.1 -0.1 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 1.2 0.1 -0.3 0.0 -0.5
growth on oleic acid YNB Glucose 0.6 0.0 0.1 0.3 -0.4
growth on oleic acid YNB Oleic Acid 0.7 0.2 0.1 0.1 -0.6
ypd buoyancy 40 hrs Low Buoyancy 0.4 0.0 0.0 0.1 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.0 0.3 -0.0 0.1 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0 0.5 0.1 -0.1 0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.3 -0.5 0.0 -0.2 1.5
facs on lipid accumulation Sorted High BODIPY Gate 0.3 0.8 0.2 -0.3 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.5 1.1 0.0 -0.2 0.4
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