Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8145: 16513 - K15304 RANBP3 Ran-binding protein 3, at 518265 to 522947 16513 mRNA_8146: 16514 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF55753, at 523156 to 525295 16514 mRNA_8147: 16515 - HMMPfam-Enoyl-CoA hydratase/isomerase family-PF00378,SUPERFAMILY--SSF52096, at 525577 to 526736 16515 mRNA_8148: 16516 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 527058 to 528382 16516 mRNA_8149: 16517 - KOG1198 Zinc-binding oxidoreductase, at 528930 to 530418 16517
Group Condition mRNA_8145 mRNA_8146 mRNA_8147 mRNA_8148 mRNA_8149
16513
16514
16515
16516
16517
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -0.9 0.4 -0.6 -0.0
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 0.4 0.1 -1.4 -0.6
growth on ricinoleic acid YNB Glucose 0.0 -0.8 0.2 -1.0 0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -0.8 -0.5 -0.4 0.6
ypd buoyancy 40 hrs Low Buoyancy -0.5 -0.1 0.2 0.0 -0.4
ypd buoyancy 40 hrs High Buoyancy -0.1 -0.4 -0.2 -0.3 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.6 -0.2 0.8 -0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.6 -0.4 -0.2 -0.8
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.0 -0.1 -0.1 -0.3
auxotrophy YNB Glucose 75mM Arginine -0.1 -0.9 0.1 0.3 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.2 0.6 -0.1 -0.3 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.3 0.1 0.3 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3 -0.2 0.1 -0.2
auxotrophy YNB Glucose -0.1 -0.7 -0.0 0.8 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3 0.0 -0.1 -0.5 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1 0.7 -0.3 -0.0 0.1
growth on oleic acid YNB Glucose 0.1 -0.1 -0.2 0.3 0.6
growth on ypd YPD -0.2 0.7 0.3 -0.3 0.2
auxotrophy YNB Glucose 75mM Methionine 0.0 -0.1 -0.3 1.2 0.1
growth on oleic acid YNB Oleic Acid 0.1 -0.6 -0.1 0.9 0.8
auxotrophy Dropout Complete -0.1 0.6 -0.1 0.9 0.3
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