Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8143: 16511 - K01515 nudF ADP-ribose pyrophosphatase, at 514530 to 515609 16511 mRNA_8144: 16512 - HMMPfam-Domain of unknown function (DUF3506)-PF12014,HMMPfam-F-box-like-PF12937,ProSiteProfiles-F-box domain profile.-PS50181,SMART-A Receptor for Ubiquitination Targets-SM00256,SUPERFAMILY--SSF81383, at 515756 to 518130 16512 mRNA_8145: 16513 - K15304 RANBP3 Ran-binding protein 3, at 518265 to 522947 16513 mRNA_8146: 16514 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729,SUPERFAMILY--SSF55753, at 523156 to 525295 16514 mRNA_8147: 16515 - HMMPfam-Enoyl-CoA hydratase/isomerase family-PF00378,SUPERFAMILY--SSF52096, at 525577 to 526736 16515
Group Condition mRNA_8143 mRNA_8144 mRNA_8145 mRNA_8146 mRNA_8147
16511
16512
16513
16514
16515
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.4 -0.1 -0.9 0.1
auxotrophy YNB Glucose 0.1 -0.6 -0.1 -0.7 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 0.0 -0.2 -0.6 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.1 0.1 -0.1 -0.4 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.4 0.0 -0.1 -0.3
facs on lipid accumulation Sorted No BODIPY Gate 0.4 0.3 0.1 -0.8 -0.5
growth on oleic acid YNB Glucose 0.2 -0.4 0.1 -0.1 -0.2
growth on ricinoleic acid YNB Glucose 0.2 0.1 0.0 -0.8 0.2
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.1 -0.1 0.0 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.1 -0.5 -0.1 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -0.2 0.1 0.4 0.1
growth on oleic acid YNB Oleic Acid 0.5 0.0 0.1 -0.6 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.1 0.1 0.3 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.6 0.3 -0.3 -0.9 0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.3 -0.0 -0.3 0.1
auxotrophy Dropout Complete -0.0 -0.3 -0.1 0.6 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 0.2 0.6 -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.4 -0.0 0.3 0.0 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.2 0.1 0.7 -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.0 0.2 0.6 -0.1
growth on ypd YPD -0.0 -0.1 -0.2 0.7 0.3
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