Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8134: 16502 - K17891 ERV2 FAD-linked sulfhydryl oxidase, at 499716 to 500735 16502 mRNA_8135: 16503 - K00804 GGPS1 geranylgeranyl diphosphate synthase, type III, at 500872 to 502376 16503 mRNA_8136: 16504 - KOG0157 Cytochrome P450 CYP4/CYP19/CYP26 subfamilies, at 502588 to 504412 16504 mRNA_8137: 16505 - K00586 DPH5 diphthine methyl ester synthase, at 505150 to 506230 16505 mRNA_8138: 16506 - Hypothetical Protein, at 506411 to 507790 16506
Group Condition mRNA_8134 mRNA_8135 mRNA_8136 mRNA_8137 mRNA_8138
16502
16503
16504
16505
16506
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -3.6 -0.6 -3.1 -0.7
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -3.4 0.3 -2.4 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 -0.6 -0.4 -3.8 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.3 -1.5 -0.2 -1.9 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -2.9 0.1 -1.1 -0.0
growth on oleic acid YNB Glucose -0.3 -1.4 -0.5 -1.7 0.1
growth on ricinoleic acid YNB Glucose -0.1 -0.8 -0.4 -2.4 0.2
auxotrophy Dropout Complete 0.2 -1.3 0.1 -2.5 0.3
auxotrophy YNB Glucose 0.4 -1.7 0.5 -2.2 0.2
growth on oleic acid YNB Oleic Acid 0.1 -1.0 -0.3 -1.1 0.0
growth on ypd YPD 0.0 -1.7 0.5 -0.4 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 -0.6 0.1 0.0 -1.0
auxotrophy YNB Glucose 75mM Arginine 0.5 -1.1 0.3 -1.4 0.5
auxotrophy YNB Glucose 75mM Methionine 0.5 -1.9 0.2 -0.7 0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.6 -0.3 0.8 -0.2
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2 0.3 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2 0.2 -0.1 1.2 -0.4
ypd buoyancy 40 hrs Low Buoyancy 0.3 0.9 0.2 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.4 0.1 -0.2 1.5 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.5 1.6 0.2 0.2 0.7
ypd buoyancy 40 hrs High Buoyancy 0.3 0.6 0.0 1.9 -0.4
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