Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8113: 16481 - HMMPfam-Thioesterase-like superfamily-PF13279,SUPERFAMILY--SSF54637, at 450205 to 451053 16481 mRNA_8114: 16482 - K09648 IMP2 mitochondrial inner membrane protease subunit 2, at 451409 to 451898 16482 mRNA_8115: 16483 - K03868 RBX1, ROC1 RING-box protein 1, at 452309 to 453227 16483 mRNA_8116: 16484 - K00949 thiN, TPK1, THI80 thiamine pyrophosphokinase, at 453564 to 454690 16484 mRNA_8117: 16485 - K06041 kdsD, kpsF arabinose-5-phosphate isomerase, at 455080 to 456482 16485
Group Condition mRNA_8113 mRNA_8114 mRNA_8115 mRNA_8116 mRNA_8117
16481
16482
16483
16484
16485
growth on ricinoleic acid YNB Ricinoleic Acid -0.5     -5.0 0.9
growth on ricinoleic acid YNB Glucose -0.5     -3.7 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2     -3.7 0.3
facs on lipid accumulation Sorted Low BODIPY Gate 0.0     -3.0 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.4     -4.3 0.8
facs on lipid accumulation Sorted No BODIPY Gate 0.1     -2.5 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.6     -3.5 0.6
facs on lipid accumulation Sorted High BODIPY Gate -0.5     -1.5 0.1
growth on oleic acid YNB Glucose -0.0     -2.0 0.4
auxotrophy YNB Glucose 0.5     -2.8 0.7
auxotrophy Dropout Complete 0.5     -2.7 0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3     -1.2 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3     -1.1 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1     -0.6 0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2     -0.5 0.0
growth on oleic acid YNB Oleic Acid 0.1     -0.9 0.6
ypd buoyancy 40 hrs Median Buoyancy -0.2     -0.0 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.2     -0.0 0.3
growth on ypd YPD -0.2     0.4 0.0
ypd buoyancy 40 hrs High Buoyancy -0.2     0.8 0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.2     1.4 0.3
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