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Protein
Homologs
Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8101: 16469 - Hypothetical Protein, at 419844 to 420309
16469
mRNA_8102: 16470 - Hypothetical Protein, at 420636 to 421256
16470
mRNA_8103: 16471 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 421864 to 423445
16471
mRNA_8104: 16472 - Hypothetical Protein, at 423504 to 424497
16472
mRNA_8105: 16473 - Hypothetical Protein, at 424921 to 425494
16473
Group
Condition
mRNA_8101
mRNA_8102
mRNA_8103
mRNA_8104
mRNA_8105
16469
16470
16471
16472
16473
ypd buoyancy
40 hrs No Buoyancy Separation
-0.4
-0.8
-0.8
-0.0
0.1
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.1
-0.5
0.0
-0.2
auxotrophy
Dropout Complete
0.1
-0.4
-0.6
0.2
-0.0
auxotrophy
YNB Glucose
-0.1
0.2
-0.4
-0.2
-0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.6
-0.3
-0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.4
-0.2
0.7
0.0
growth on oleic acid
YNB Oleic Acid
-0.2
-0.3
0.2
0.2
0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.5
-0.1
-0.1
0.2
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.4
-0.6
0.1
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.0
0.2
0.1
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
0.6
-0.0
-0.0
-0.0
-0.4
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.0
0.1
0.1
0.1
growth on ypd
YPD
-0.2
0.3
-0.1
0.0
0.2
ypd buoyancy
40 hrs High Buoyancy
-0.1
0.6
0.1
-0.3
0.0
growth on oleic acid
YNB Glucose
-0.2
-0.0
0.1
0.4
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
-0.3
0.3
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.0
0.5
0.0
-0.0
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.0
0.5
-0.3
0.2
0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.3
0.1
-0.1
0.5
-0.1
growth on ricinoleic acid
YNB Glucose
0.4
0.3
-0.1
0.1
-0.0
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.0
0.1
0.5
0.2
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