Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8099: 16467 - HMMPfam-SUR7/PalI family-PF06687, at 416888 to 417757 16467 mRNA_8100: 16468 - BLAST DigA protein [Rhizoctonia solani AG-3 Rhs1AP], at 418661 to 419532 16468 mRNA_8101: 16469 - Hypothetical Protein, at 419844 to 420309 16469 mRNA_8102: 16470 - Hypothetical Protein, at 420636 to 421256 16470 mRNA_8103: 16471 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 421864 to 423445 16471
Group Condition mRNA_8099 mRNA_8100 mRNA_8101 mRNA_8102 mRNA_8103
16467
16468
16469
16470
16471
ypd buoyancy 40 hrs No Buoyancy Separation -0.6 -1.7 -0.4 -0.8 -0.8
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.8 -0.3 -0.2 -0.4 -0.2
auxotrophy Dropout Complete -0.7 -0.2 0.1 -0.4 -0.6
auxotrophy YNB Glucose 75mM Arginine -0.5 -0.6 0.1 0.4 -0.6
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -0.2 -0.3 -0.1 -0.5
facs on lipid accumulation Sorted High BODIPY Gate -0.7 -0.1 -0.5 0.5 -0.1
auxotrophy YNB Glucose -0.2 -0.4 -0.1 0.2 -0.4
growth on ypd YPD -1.8 1.0 -0.2 0.3 -0.1
growth on ricinoleic acid YNB Glucose -0.8 -0.6 0.4 0.3 -0.1
growth on oleic acid YNB Oleic Acid 0.2 -0.4 -0.2 -0.3 0.2
auxotrophy YNB Glucose 75mM Methionine -0.2 -0.1 0.3 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.9 0.2 0.6 -0.0 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.0 0.0 -0.0 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.1 0.6 -0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 0.1 0.0 0.5 -0.3
growth on oleic acid YNB Glucose 0.6 -0.2 -0.2 -0.0 0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.3 0.0 -0.2 -0.0 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 0.2 0.3 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy 0.4 -0.4 0.0 0.5 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.3 0.2 -0.0 0.2 0.1
ypd buoyancy 40 hrs High Buoyancy 0.6 0.3 -0.1 0.6 0.1
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