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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8093: 16461 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 402120 to 403069
16461
mRNA_8094: 16462 - K10775 PAL phenylalanine ammonia-lyase, at 403260 to 405803
16462
mRNA_8095: 16463 - K17508 PTC7, PPTC7 protein phosphatase PTC7, at 406311 to 408343
16463
mRNA_8096: 16464 - K13338 PEX1 peroxin-1, at 408811 to 412943
16464
mRNA_8097: 16465 - KOG0118 FOG RRM domain, at 413277 to 414722
16465
Group
Condition
mRNA_8093
mRNA_8094
mRNA_8095
mRNA_8096
mRNA_8097
16461
16462
16463
16464
16465
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
0.5
-0.4
-1.9
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.1
-0.8
-0.5
auxotrophy
YNB Glucose
-0.1
-0.1
-0.3
-0.7
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.1
-0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.0
-0.1
-0.2
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.3
0.2
-0.1
growth on oleic acid
YNB Oleic Acid
0.1
-0.2
0.2
-0.0
auxotrophy
Dropout Complete
0.5
-0.0
-0.3
-0.1
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
0.0
0.1
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.1
-0.1
0.2
0.0
growth on oleic acid
YNB Glucose
-0.2
-0.3
0.3
0.4
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
0.1
0.3
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
0.0
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.1
-0.2
0.1
0.4
growth on ypd
YPD
0.4
-0.4
0.4
0.0
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.2
0.1
0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.5
-0.4
0.2
0.2
ypd buoyancy
40 hrs Median Buoyancy
0.1
0.2
0.2
0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
0.3
0.0
-0.0
facs on lipid accumulation
Sorted Low BODIPY Gate
0.2
-0.4
1.2
0.0
ypd buoyancy
40 hrs Low Buoyancy
0.5
0.2
0.3
0.3
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