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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8085: 16453 - HMMPfam-Glycosyltransferase sugar-binding region containing DXD motif-PF04488,SUPERFAMILY--SSF53448, at 384174 to 386638
16453
mRNA_8086: 16454 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 387479 to 389690
16454
mRNA_8087: 16455 - ProSiteProfiles-BRCT domain profile.-PS50172,SUPERFAMILY--SSF52113, at 390776 to 392470
16455
mRNA_8088: 16456 - Hypothetical Protein, at 392767 to 393298
16456
mRNA_8089: 16457 - Hypothetical Protein, at 393616 to 394916
16457
Group
Condition
mRNA_8085
mRNA_8086
mRNA_8087
mRNA_8088
mRNA_8089
16453
16454
16455
16456
16457
growth on ypd
YPD
0.0
-0.5
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-0.7
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.3
0.3
-0.7
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.3
0.1
auxotrophy
YNB Glucose
-0.3
0.2
-0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.3
-0.3
0.3
auxotrophy
YNB Glucose 75mM Arginine
0.1
-0.1
-0.2
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.4
0.3
-0.0
ypd buoyancy
40 hrs Median Buoyancy
-0.0
-0.1
0.0
growth on oleic acid
YNB Oleic Acid
-0.0
-0.3
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.2
0.1
-0.2
growth on oleic acid
YNB Glucose
-0.0
-0.2
0.2
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.0
0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.3
0.6
-0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.2
0.1
auxotrophy
Dropout Complete
-0.1
0.2
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.2
-0.0
ypd buoyancy
40 hrs No Buoyancy Separation
-0.5
0.2
0.7
growth on ricinoleic acid
YNB Glucose
0.1
0.4
0.0
ypd buoyancy
40 hrs High Buoyancy
0.2
-0.1
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.3
0.4
0.2
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