Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8077: 16445 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 369539 to 370935 16445 mRNA_8078: 16446 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 371130 to 372195 16446 mRNA_8079: 16447 - BLAST PRMT5-domain-containing protein [Sanghuangporus baumii], at 372456 to 373383 16447 mRNA_8080: 16448 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 373552 to 376166 16448 mRNA_8081: 16449 - K00905 BCKDK [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase, at 376342 to 377975 16449
Group Condition mRNA_8077 mRNA_8078 mRNA_8079 mRNA_8080 mRNA_8081
16445
16446
16447
16448
16449
facs on lipid accumulation Sorted Low BODIPY Gate -2.2 -1.9 -0.5 -0.1 0.5
growth on oleic acid YNB Oleic Acid -0.1 0.0 0.1 -0.3 -1.9
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 -0.2 0.2 -0.1 -1.8
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 -0.3 0.1 0.2 -1.6
ypd buoyancy 40 hrs No Buoyancy Separation 0.1 -1.2 -0.7 0.4 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.7 0.3 -0.1 -0.0 -0.7
growth on oleic acid YNB Glucose -0.1 -0.1 0.5 -0.2 -1.2
auxotrophy YNB Glucose -0.2 0.1 0.1 -0.4 -0.4
growth on ricinoleic acid YNB Glucose -0.2 -0.0 -0.2 0.2 -0.6
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.5 -0.2 0.0 -1.0
growth on ypd YPD -0.0 -0.4 -0.1 0.5 -0.5
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 0.1 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 -0.8 -0.5 -0.1 0.9
auxotrophy Dropout Complete -0.1 0.4 0.1 0.1 -0.6
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.1 0.1 0.1 -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 -0.3 0.1 -0.1 0.7
auxotrophy YNB Glucose 75mM Methionine -0.1 0.3 0.2 -0.3 0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 0.3 0.1 -0.2 0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.1 -0.0 -0.3 1.0
facs on lipid accumulation Sorted No BODIPY Gate -0.6 0.1 0.0 0.1 1.2
ypd buoyancy 40 hrs High Buoyancy 0.1 0.5 0.3 0.1 0.1
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