Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8074: 16442 - Hypothetical Protein, at 363316 to 363918 16442 mRNA_8075: 16443 - K13525 VCP, CDC48 transitional endoplasmic reticulum ATPase, at 364328 to 367178 16443 mRNA_8076: 16444 - Hypothetical Protein, at 368382 to 369179 16444 mRNA_8077: 16445 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 369539 to 370935 16445 mRNA_8078: 16446 - HMMPfam-ER membrane protein SH3-PF08229,SMART-ER membrane protein SH3-SM00786, at 371130 to 372195 16446
Group Condition mRNA_8074 mRNA_8075 mRNA_8076 mRNA_8077 mRNA_8078
16442
16443
16444
16445
16446
facs on lipid accumulation Sorted Low BODIPY Gate -1.3   -0.6 -2.2 -1.9
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   0.1 0.1 -1.2
facs on lipid accumulation Sorted No BODIPY Gate -0.5   -0.1 -0.6 0.1
facs on lipid accumulation Sorted High BODIPY Gate -0.8   0.0 -0.7 0.3
growth on ypd YPD -0.2   -0.1 -0.0 -0.4
growth on ricinoleic acid YNB Ricinoleic Acid -0.5   0.1 -0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6   -0.1 -0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2   -0.2 0.1 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1   -0.1 0.2 -0.8
growth on oleic acid YNB Oleic Acid -0.3   -0.1 -0.1 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2   -0.2 -0.1 0.3
growth on oleic acid YNB Glucose 0.0   -0.1 -0.1 -0.1
auxotrophy YNB Glucose -0.1   -0.1 -0.2 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2   0.1 -0.2 -0.3
growth on ricinoleic acid YNB Glucose 0.1   0.1 -0.2 -0.0
auxotrophy YNB Glucose 75mM Arginine 0.5   -0.1 -0.2 -0.1
auxotrophy Dropout Complete 0.0   -0.1 -0.1 0.4
auxotrophy YNB Glucose 75mM Methionine 0.1   -0.1 -0.1 0.3
ypd buoyancy 40 hrs Median Buoyancy 0.3   0.0 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.3   0.0 0.1 0.5
ypd buoyancy 40 hrs Low Buoyancy 0.4   -0.0 0.1 0.5
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