Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_8073: 16441 - Hypothetical Protein, at 361679 to 362906 16441 mRNA_8074: 16442 - Hypothetical Protein, at 363316 to 363918 16442 mRNA_8075: 16443 - K13525 VCP, CDC48 transitional endoplasmic reticulum ATPase, at 364328 to 367178 16443 mRNA_8076: 16444 - Hypothetical Protein, at 368382 to 369179 16444 mRNA_8077: 16445 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 369539 to 370935 16445
Group Condition mRNA_8073 mRNA_8074 mRNA_8075 mRNA_8076 mRNA_8077
16441
16442
16443
16444
16445
facs on lipid accumulation Sorted Low BODIPY Gate 0.1 -1.3   -0.6 -2.2
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.8   0.0 -0.7
facs on lipid accumulation Sorted No BODIPY Gate 0.2 -0.5   -0.1 -0.6
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.2 -0.6   -0.1 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 -0.5   0.1 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 -0.2   -0.2 0.1
growth on oleic acid YNB Oleic Acid -0.1 -0.3   -0.1 -0.1
auxotrophy YNB Glucose -0.2 -0.1   -0.1 -0.2
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.5   0.1 0.1
growth on oleic acid YNB Glucose -0.3 0.0   -0.1 -0.1
growth on ypd YPD -0.0 -0.2   -0.1 -0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 -0.2   -0.2 -0.1
auxotrophy YNB Glucose 75mM Methionine -0.3 0.1   -0.1 -0.1
auxotrophy YNB Glucose 75mM Arginine -0.4 0.5   -0.1 -0.2
auxotrophy Dropout Complete -0.0 0.0   -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.3 -0.1   -0.1 0.2
growth on ricinoleic acid YNB Glucose -0.1 0.1   0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 0.2   0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.3   0.0 0.0
ypd buoyancy 40 hrs High Buoyancy 0.0 0.3   0.0 0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.4   -0.0 0.1
remove
mRNA_8073
plot
remove
mRNA_8074
plot
remove
mRNA_8075
remove
mRNA_8076
plot
remove
mRNA_8077
plot