Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8067: 16435 - K12399 AP3S AP-3 complex subunit sigma, at 346568 to 347476 16435 mRNA_8068: 16436 - KOG1198 Zinc-binding oxidoreductase, at 347734 to 349027 16436 mRNA_8069: 16437 - K11240 MSG5 tyrosine-protein phosphatase MSG5, at 349266 to 352237 16437 mRNA_8070: 16438 - KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain, at 352971 to 356378 16438 mRNA_8071: 16439 - Hypothetical Protein, at 357161 to 359241 16439
Group Condition mRNA_8067 mRNA_8068 mRNA_8069 mRNA_8070 mRNA_8071
16435
16436
16437
16438
16439
ypd buoyancy 40 hrs No Buoyancy Separation -2.7 -0.2 0.1 0.3 0.4
growth on ricinoleic acid YNB Ricinoleic Acid -1.2 -0.5 1.0 -0.4 0.4
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.2 -0.1 0.3 -0.9
facs on lipid accumulation Sorted High BODIPY Gate 0.1 0.1 0.5 -0.5 -0.8
growth on oleic acid YNB Oleic Acid -0.3 -0.4 0.3 -0.1 -0.1
growth on oleic acid YNB Glucose -0.3 -0.3 0.4 0.0 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 -0.2 0.0 -0.3 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1 -0.1 0.0 -0.1
growth on ypd YPD -0.4 -0.0 0.1 0.2 -0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.2 0.1 0.3 -0.0 -0.6
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -0.3 1.0 0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1 -0.2 -0.1 -0.0 0.2
auxotrophy YNB Glucose 75mM Arginine 0.6 -0.5 0.3 -0.2 0.2
auxotrophy YNB Glucose 0.5 -0.3 0.6 -0.5 0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.3 0.2 0.3 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.0 0.0 0.4 0.1 0.4
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6 0.0 0.2 0.7 -0.5
growth on ricinoleic acid YNB Glucose 0.2 -0.3 0.7 -0.1 0.3
auxotrophy Dropout Complete 1.0 -0.3 0.2 0.0 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7 0.1 0.3 0.3 0.1
auxotrophy YNB Glucose 75mM Methionine 1.0 -0.3 0.4 -0.0 0.3
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