Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_8066: 16434 - K20181 VPS18, PEP3 vacuolar protein sorting-associated protein 18, at 341792 to 345856 16434 mRNA_8067: 16435 - K12399 AP3S AP-3 complex subunit sigma, at 346568 to 347476 16435 mRNA_8068: 16436 - KOG1198 Zinc-binding oxidoreductase, at 347734 to 349027 16436 mRNA_8069: 16437 - K11240 MSG5 tyrosine-protein phosphatase MSG5, at 349266 to 352237 16437 mRNA_8070: 16438 - KOG2744 DNA-binding proteins Bright/BRCAA1/RBP1 and related proteins containing BRIGHT domain, at 352971 to 356378 16438
Group Condition mRNA_8066 mRNA_8067 mRNA_8068 mRNA_8069 mRNA_8070
16434
16435
16436
16437
16438
ypd buoyancy 40 hrs No Buoyancy Separation   -2.7 -0.2 0.1 0.3
growth on ricinoleic acid YNB Ricinoleic Acid   -1.2 -0.5 1.0 -0.4
growth on oleic acid YNB Oleic Acid   -0.3 -0.4 0.3 -0.1
growth on oleic acid YNB Glucose   -0.3 -0.3 0.4 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.3 -0.2 0.0 -0.3
growth on ypd YPD   -0.4 -0.0 0.1 0.2
ypd buoyancy 40 hrs Median Buoyancy   0.1 -0.2 -0.1 -0.0
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.9 -0.3 1.0 0.2
ypd buoyancy 40 hrs High Buoyancy   0.2 -0.1 -0.1 0.0
facs on lipid accumulation Sorted Low BODIPY Gate   0.2 -0.2 -0.1 0.3
auxotrophy YNB Glucose 75mM Arginine   0.6 -0.5 0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate   0.1 0.1 0.5 -0.5
auxotrophy YNB Glucose   0.5 -0.3 0.6 -0.5
ypd buoyancy 40 hrs Low Buoyancy   0.0 0.0 0.4 0.1
facs on lipid accumulation Sorted No BODIPY Gate   0.2 0.1 0.3 -0.0
growth on ricinoleic acid YNB Glucose   0.2 -0.3 0.7 -0.1
auxotrophy Dropout Complete   1.0 -0.3 0.2 0.0
auxotrophy YNB Glucose 75mM Methionine   1.0 -0.3 0.4 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.5 0.3 0.2 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.7 0.1 0.3 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6 0.0 0.2 0.7
remove
mRNA_8066
plot		 remove
mRNA_8067
plot		 remove
mRNA_8068		 remove
mRNA_8069
plot		 remove
mRNA_8070
plot