Fitness for 5 genes in Rhodosporidium toruloides IFO0880

Add gene:

Number of genes on each side:  

Top 21 experiments (either direction), sorted by average fitness

Or view all 21 experiments

500 nt mRNA_8064: 16432 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 333407 to 335918 16432 mRNA_8065: 16433 - KOG0732 AAA+-type ATPase containing the bromodomain, at 336013 to 341106 16433 mRNA_8066: 16434 - K20181 VPS18, PEP3 vacuolar protein sorting-associated protein 18, at 341792 to 345856 16434 mRNA_8067: 16435 - K12399 AP3S AP-3 complex subunit sigma, at 346568 to 347476 16435 mRNA_8068: 16436 - KOG1198 Zinc-binding oxidoreductase, at 347734 to 349027 16436
Group Condition mRNA_8064 mRNA_8065 mRNA_8066 mRNA_8067 mRNA_8068
16432
16433
16434
16435
16436
ypd buoyancy 40 hrs No Buoyancy Separation -0.6     -2.7 -0.2
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     -1.2 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.3     -0.9 -0.3
growth on oleic acid YNB Glucose -0.1     -0.3 -0.3
growth on oleic acid YNB Oleic Acid 0.1     -0.3 -0.4
growth on ypd YPD 0.0     -0.4 -0.0
ypd buoyancy 40 hrs Median Buoyancy 0.1     0.1 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.0     0.0 0.0
auxotrophy YNB Glucose 75mM Arginine 0.0     0.6 -0.5
auxotrophy YNB Glucose -0.1     0.5 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.1     0.2 0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2     0.2 -0.2
facs on lipid accumulation Sorted High BODIPY Gate -0.0     0.1 0.1
growth on ricinoleic acid YNB Glucose 0.2     0.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1     0.3 -0.2
ypd buoyancy 40 hrs High Buoyancy 0.1     0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.2     0.6 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2     0.7 0.1
auxotrophy Dropout Complete 0.1     1.0 -0.3
auxotrophy YNB Glucose 75mM Methionine 0.0     1.0 -0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1     0.5 0.3
remove
mRNA_8064
plot		 remove
mRNA_8065
plot		 remove
mRNA_8066		 remove
mRNA_8067
plot		 remove
mRNA_8068
plot