Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8060: 16428 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 325618 to 328246 16428 mRNA_8061: 16429 - BLAST protein of unknown function [Taphrina deformans PYCC ..., at 329115 to 329494 16429 mRNA_8062: 16430 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 329647 to 331079 16430 mRNA_8063: 16431 - HMMPfam-Protein of unknown function (DUF3500)-PF12006, at 331587 to 333110 16431 mRNA_8064: 16432 - HMMPfam-Fungal specific transcription factor domain-PF04082,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SMART-Fungal specific transcription factor domain-SM00906,SUPERFAMILY--SSF57701, at 333407 to 335918 16432
Group Condition mRNA_8060 mRNA_8061 mRNA_8062 mRNA_8063 mRNA_8064
16428
16429
16430
16431
16432
ypd buoyancy 40 hrs No Buoyancy Separation -0.5   0.4 -0.8 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -1.2   -0.2 0.2 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5   0.1 -0.3 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1   -0.1 -0.3 -0.2
facs on lipid accumulation Sorted High BODIPY Gate 0.0   -0.1 -0.3 -0.0
growth on ypd YPD -0.2   -0.5 0.2 0.0
growth on oleic acid YNB Oleic Acid -0.1   -0.6 0.2 0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   -0.0 -0.3 0.1
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.0 -0.1 0.0
ypd buoyancy 40 hrs Low Buoyancy 0.0   -0.4 0.1 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0   -0.2 -0.0 0.1
growth on oleic acid YNB Glucose -0.0   -0.1 0.2 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   0.0 0.2 -0.2
auxotrophy YNB Glucose -0.1   -0.0 0.3 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0   0.0 0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy 0.1   -0.1 0.0 0.1
auxotrophy Dropout Complete -0.1   0.0 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine -0.1   0.1 0.2 0.0
facs on lipid accumulation Sorted Low BODIPY Gate -0.1   -0.0 0.3 0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.5   -0.5 0.2 0.3
growth on ricinoleic acid YNB Glucose 0.2   -0.1 0.3 0.2
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