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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8036: 16404 - K01942 HLCS biotin--protein ligase, at 279404 to 281646
16404
mRNA_8037: 16405 - K14797 ENP1, BYSL essential nuclear protein 1, at 281818 to 283593
16405
mRNA_8038: 16406 - K05757 ARPC1A_B actin related protein 2/3 complex, subunit 1A/1B, at 283766 to 285253
16406
mRNA_8039: 16407 - HMMPfam-DASH complex subunit Dad3-PF08656, at 285346 to 285719
16407
mRNA_8040: 16408 - BLAST putative Structural constituent of cytoskeleton [Rhod..., at 285968 to 287416
16408
Group
Condition
mRNA_8036
mRNA_8037
mRNA_8038
mRNA_8039
mRNA_8040
16404
16405
16406
16407
16408
ypd buoyancy
40 hrs No Buoyancy Separation
-2.3
-1.3
auxotrophy
YNB Glucose
-1.2
-0.6
growth on ricinoleic acid
YNB Glucose
-1.3
-0.4
auxotrophy
Dropout Complete
-1.0
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.7
-0.6
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.9
-0.4
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
-1.0
auxotrophy
YNB Glucose 75mM Arginine
-0.6
-0.6
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.1
-0.9
growth on oleic acid
YNB Glucose
-1.0
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
0.2
-0.9
facs on lipid accumulation
Sorted High BODIPY Gate
0.3
-0.6
auxotrophy
YNB Glucose 75mM Methionine
0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
-0.4
ypd buoyancy
40 hrs Median Buoyancy
0.2
-0.3
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
-0.2
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
0.0
growth on oleic acid
YNB Oleic Acid
0.1
0.2
ypd buoyancy
40 hrs Low Buoyancy
0.7
-0.2
growth on ypd
YPD
0.1
0.5
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