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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250044 to 251923
16398
mRNA_8031: 16399 - K14325 RNPS1 RNA-binding protein with serine-rich domain 1, at 252207 to 252830
16399
mRNA_8032: 16400 - K14007 SEC24 protein transport protein SEC24, at 253423 to 257120
16400
mRNA_8033: 16401 - K08488 STX7 syntaxin 7, at 257386 to 258889
16401
mRNA_8034: 16402 - K00898 PDK2_3_4 pyruvate dehydrogenase kinase 2/3/4, at 272460 to 275670
16402
Group
Condition
mRNA_8030
mRNA_8031
mRNA_8032
mRNA_8033
mRNA_8034
16398
16399
16400
16401
16402
facs on lipid accumulation
Sorted Low BODIPY Gate
-1.8
-0.4
0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-1.1
-0.7
0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-1.7
-0.0
0.1
ypd buoyancy
40 hrs No Buoyancy Separation
-1.0
-0.0
0.0
ypd buoyancy
40 hrs Low Buoyancy
-0.6
-0.1
-0.0
growth on ricinoleic acid
YNB Ricinoleic Acid
-0.2
0.1
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.4
0.1
0.0
growth on ypd
YPD
-0.5
0.3
0.2
growth on oleic acid
YNB Glucose
0.2
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.4
0.5
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.5
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
0.5
-0.2
auxotrophy
YNB Glucose 75mM Arginine
0.3
0.1
-0.2
auxotrophy
YNB Glucose
0.3
-0.0
-0.0
auxotrophy
Dropout Complete
0.4
-0.1
0.2
growth on ricinoleic acid
YNB Glucose
0.2
0.2
0.0
auxotrophy
YNB Glucose 75mM Methionine
0.5
0.3
0.0
growth on oleic acid
YNB Oleic Acid
0.9
0.3
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.8
0.5
-0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.6
0.5
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.8
0.8
-0.1
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