Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250044 to 251923 16398 mRNA_8031: 16399 - K14325 RNPS1 RNA-binding protein with serine-rich domain 1, at 252207 to 252830 16399 mRNA_8032: 16400 - K14007 SEC24 protein transport protein SEC24, at 253423 to 257120 16400 mRNA_8033: 16401 - K08488 STX7 syntaxin 7, at 257386 to 258889 16401 mRNA_8034: 16402 - K00898 PDK2_3_4 pyruvate dehydrogenase kinase 2/3/4, at 272460 to 275670 16402
Group Condition mRNA_8030 mRNA_8031 mRNA_8032 mRNA_8033 mRNA_8034
16398
16399
16400
16401
16402
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 -0.4     0.1
facs on lipid accumulation Sorted No BODIPY Gate -1.1 -0.7     0.1
facs on lipid accumulation Sorted High BODIPY Gate -1.7 -0.0     0.1
ypd buoyancy 40 hrs No Buoyancy Separation -1.0 -0.0     0.0
ypd buoyancy 40 hrs Low Buoyancy -0.6 -0.1     -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.1     -0.3
ypd buoyancy 40 hrs High Buoyancy -0.4 0.1     0.0
growth on ypd YPD -0.5 0.3     0.2
growth on oleic acid YNB Glucose 0.2 -0.2     -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.4 0.5     0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.5 -0.2     -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0 0.5     -0.2
auxotrophy YNB Glucose 75mM Arginine 0.3 0.1     -0.2
auxotrophy YNB Glucose 0.3 -0.0     -0.0
auxotrophy Dropout Complete 0.4 -0.1     0.2
growth on ricinoleic acid YNB Glucose 0.2 0.2     0.0
auxotrophy YNB Glucose 75mM Methionine 0.5 0.3     0.0
growth on oleic acid YNB Oleic Acid 0.9 0.3     -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8 0.5     -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.6 0.5     -0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.8 0.8     -0.1
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