Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8029: 16397 - K02152 ATPeV1G, ATP6G V-type H+-transporting ATPase subunit G, at 248921 to 249552 16397 mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250044 to 251923 16398 mRNA_8031: 16399 - K14325 RNPS1 RNA-binding protein with serine-rich domain 1, at 252207 to 252830 16399 mRNA_8032: 16400 - K14007 SEC24 protein transport protein SEC24, at 253423 to 257120 16400 mRNA_8033: 16401 - K08488 STX7 syntaxin 7, at 257386 to 258889 16401
Group Condition mRNA_8029 mRNA_8030 mRNA_8031 mRNA_8032 mRNA_8033
16397
16398
16399
16400
16401
facs on lipid accumulation Sorted Low BODIPY Gate   -1.8 -0.4    
facs on lipid accumulation Sorted No BODIPY Gate   -1.1 -0.7    
facs on lipid accumulation Sorted High BODIPY Gate   -1.7 -0.0    
ypd buoyancy 40 hrs No Buoyancy Separation   -1.0 -0.0    
ypd buoyancy 40 hrs Low Buoyancy   -0.6 -0.1    
ypd buoyancy 40 hrs High Buoyancy   -0.4 0.1    
growth on ypd YPD   -0.5 0.3    
growth on ricinoleic acid YNB Ricinoleic Acid   -0.2 0.1    
ypd buoyancy 40 hrs Median Buoyancy   -0.4 0.5    
growth on oleic acid YNB Glucose   0.2 -0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.5 -0.2    
auxotrophy Dropout Complete   0.4 -0.1    
auxotrophy YNB Glucose   0.3 -0.0    
auxotrophy YNB Glucose 75mM Arginine   0.3 0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -0.0 0.5    
growth on ricinoleic acid YNB Glucose   0.2 0.2    
auxotrophy YNB Glucose 75mM Methionine   0.5 0.3    
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.6 0.5    
growth on oleic acid YNB Oleic Acid   0.9 0.3    
growth on ricinoleic acid YNB Methylricinoleic Acid   0.8 0.5    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.8 0.8    
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