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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8027: 16395 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 243826 to 244717
16395
mRNA_8028: 16396 - K06100 SYMPK symplekin, at 244729 to 248815
16396
mRNA_8029: 16397 - K02152 ATPeV1G, ATP6G V-type H+-transporting ATPase subunit G, at 248921 to 249552
16397
mRNA_8030: 16398 - KOG0116 RasGAP SH3 binding protein rasputin, contains NTF2 and RRM domains, at 250044 to 251923
16398
mRNA_8031: 16399 - K14325 RNPS1 RNA-binding protein with serine-rich domain 1, at 252207 to 252830
16399
Group
Condition
mRNA_8027
mRNA_8028
mRNA_8029
mRNA_8030
mRNA_8031
16395
16396
16397
16398
16399
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
-1.8
-0.4
facs on lipid accumulation
Sorted High BODIPY Gate
-0.3
-1.7
-0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.0
-1.1
-0.7
ypd buoyancy
40 hrs No Buoyancy Separation
0.0
-1.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.0
-0.6
-0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.7
0.5
-0.2
growth on ypd
YPD
-0.2
-0.5
0.3
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
-0.2
0.1
ypd buoyancy
40 hrs Median Buoyancy
-0.2
-0.4
0.5
growth on oleic acid
YNB Glucose
-0.2
0.2
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.1
-0.4
0.1
auxotrophy
YNB Glucose
-0.2
0.3
-0.0
growth on ricinoleic acid
YNB Glucose
-0.2
0.2
0.2
auxotrophy
Dropout Complete
-0.0
0.4
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.3
0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.1
-0.0
0.5
auxotrophy
YNB Glucose 75mM Methionine
0.0
0.5
0.3
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.3
0.6
0.5
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
0.8
0.5
growth on oleic acid
YNB Oleic Acid
-0.0
0.9
0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.1
0.8
0.8
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