Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8023: 16391 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 230764 to 233185 16391 mRNA_8024: 16392 - K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5, at 233351 to 234544 16392 mRNA_8025: 16393 - KOG0118 FOG RRM domain, at 235031 to 239261 16393 mRNA_8026: 16394 - K03515 REV1 DNA repair protein REV1, at 239573 to 243561 16394 mRNA_8027: 16395 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 243826 to 244717 16395
Group Condition mRNA_8023 mRNA_8024 mRNA_8025 mRNA_8026 mRNA_8027
16391
16392
16393
16394
16395
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.0   -0.3 -0.4 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.7   -0.5 -0.0 0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.1   -0.5 -0.2 -0.3
growth on ricinoleic acid YNB Ricinoleic Acid -0.2   -0.6 0.0 0.0
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0   -0.2 0.0 -0.4
facs on lipid accumulation Sorted No BODIPY Gate -0.3   -0.3 0.0 -0.0
growth on oleic acid YNB Glucose -0.1   -0.3 0.0 -0.2
growth on ypd YPD 0.0   -0.1 -0.1 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.3   -0.1 0.2 -0.2
auxotrophy YNB Glucose -0.2   -0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3   -0.4 -0.0 -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.2   -0.4 0.3 0.0
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.1 0.1 -0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1   -0.1 0.1 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.3   -0.1 0.3 0.0
ypd buoyancy 40 hrs High Buoyancy -0.3   -0.2 0.2 0.1
auxotrophy YNB Glucose 75mM Methionine -0.2   0.0 0.1 0.0
growth on ricinoleic acid YNB Glucose -0.1   0.1 0.2 -0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1   -0.1 0.2 -0.1
growth on oleic acid YNB Oleic Acid 0.1   0.0 0.0 -0.0
auxotrophy Dropout Complete -0.0   -0.1 0.4 -0.0
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