Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227452 to 229516 16389 mRNA_8022: 16390 - BLAST Ubiquinone biosynthesis protein coq9, mitochondrial [..., at 229628 to 230640 16390 mRNA_8023: 16391 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 230764 to 233185 16391 mRNA_8024: 16392 - K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5, at 233351 to 234544 16392 mRNA_8025: 16393 - KOG0118 FOG RRM domain, at 235031 to 239261 16393
Group Condition mRNA_8021 mRNA_8022 mRNA_8023 mRNA_8024 mRNA_8025
16389
16390
16391
16392
16393
facs on lipid accumulation Sorted Low BODIPY Gate -0.2   -0.7   -0.5
ypd buoyancy 40 hrs Median Buoyancy -0.3   -0.3   -0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1   -0.3   -0.3
ypd buoyancy 40 hrs No Buoyancy Separation -0.0   -0.2   -0.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.4   -0.0   -0.2
ypd buoyancy 40 hrs Low Buoyancy -0.1   -0.3   -0.1
facs on lipid accumulation Sorted High BODIPY Gate 0.0   0.1   -0.5
growth on ricinoleic acid YNB Ricinoleic Acid 0.3   -0.2   -0.6
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1   0.0   -0.3
growth on oleic acid YNB Glucose 0.0   -0.1   -0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3   0.1   -0.1
auxotrophy YNB Glucose 75mM Arginine -0.1   -0.1   -0.1
auxotrophy YNB Glucose 0.1   -0.2   -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.0   -0.1   -0.1
ypd buoyancy 40 hrs High Buoyancy 0.3   -0.3   -0.2
growth on ypd YPD -0.0   0.0   -0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.1   0.3   -0.4
auxotrophy Dropout Complete 0.2   -0.0   -0.1
auxotrophy YNB Glucose 75mM Methionine 0.3   -0.2   0.0
growth on oleic acid YNB Oleic Acid 0.0   0.1   0.0
growth on ricinoleic acid YNB Glucose 0.2   -0.1   0.1
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