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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_8021: 16389 - HMMPfam-NAD(P)-binding Rossmann-like domain-PF13450,SUPERFAMILY--SSF51905, at 227452 to 229516
16389
mRNA_8022: 16390 - BLAST Ubiquinone biosynthesis protein coq9, mitochondrial [..., at 229628 to 230640
16390
mRNA_8023: 16391 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSitePatterns-Trp-Asp (WD) repeats signature.-PS00678,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 230764 to 233185
16391
mRNA_8024: 16392 - K02988 RP-S5, MRPS5, rpsE small subunit ribosomal protein S5, at 233351 to 234544
16392
mRNA_8025: 16393 - KOG0118 FOG RRM domain, at 235031 to 239261
16393
Group
Condition
mRNA_8021
mRNA_8022
mRNA_8023
mRNA_8024
mRNA_8025
16389
16390
16391
16392
16393
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.2
-0.7
-0.5
ypd buoyancy
40 hrs Median Buoyancy
-0.3
-0.3
-0.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.1
-0.3
-0.3
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
-0.2
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.4
-0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
-0.1
-0.3
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
0.0
0.1
-0.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
-0.2
-0.6
buoyancy on lipid accumulation
40 hrs High Buoyancy
-0.1
0.0
-0.3
growth on oleic acid
YNB Glucose
0.0
-0.1
-0.3
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.3
0.1
-0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.1
-0.1
-0.1
auxotrophy
YNB Glucose
0.1
-0.2
-0.1
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.3
-0.3
-0.2
growth on ypd
YPD
-0.0
0.0
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.1
0.3
-0.4
auxotrophy
Dropout Complete
0.2
-0.0
-0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
-0.2
0.0
growth on oleic acid
YNB Oleic Acid
0.0
0.1
0.0
growth on ricinoleic acid
YNB Glucose
0.2
-0.1
0.1
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