Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8011: 16379 - K09537 DNAJC17 DnaJ homolog subfamily C member 17, at 207819 to 208967 16379 mRNA_8012: 16380 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 209272 to 211609 16380 mRNA_8013: 16381 - SUPERFAMILY--SSF58113, at 212070 to 213325 16381 mRNA_8014: 16382 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 213638 to 214851 16382 mRNA_8015: 16383 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 215153 to 216105 16383
Group Condition mRNA_8011 mRNA_8012 mRNA_8013 mRNA_8014 mRNA_8015
16379
16380
16381
16382
16383
facs on lipid accumulation Sorted High BODIPY Gate -0.3 -0.3 -1.5 0.1 0.0
ypd buoyancy 40 hrs High Buoyancy -0.3 -0.3 -0.3 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.1 -0.0 -0.3 0.1 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.5 0.1 -0.6 -0.2 -0.1
growth on oleic acid YNB Glucose -0.4 0.5 0.0 -0.0 -0.2
ypd buoyancy 40 hrs Low Buoyancy 0.3 -0.1 -0.2 -0.0 -0.2
facs on lipid accumulation Sorted No BODIPY Gate -0.4 -0.3 0.4 -0.0 0.3
auxotrophy YNB Glucose 75mM Arginine -0.4 -0.0 0.5 -0.1 0.0
growth on oleic acid YNB Oleic Acid 0.1 0.5 0.1 -0.1 -0.0
growth on ypd YPD 0.5 0.2 0.1 -0.0 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 2.0 -0.3 -0.9 0.0 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.9 -0.2 -1.1 0.0 0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 0.2 0.2 -0.0 0.2
auxotrophy YNB Glucose 75mM Methionine -0.6 0.2 1.0 0.3 0.1
auxotrophy Dropout Complete -0.3 0.2 0.7 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate -1.8 0.4 2.8 -0.1 -0.0
auxotrophy YNB Glucose 0.2 0.2 0.4 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.4 0.3 0.1 0.4
growth on ricinoleic acid YNB Glucose 1.0 0.3 0.1 -0.1 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 2.2 -0.2 -0.7 0.2 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 2.1 0.0 0.8 0.1 -0.2
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