Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_8009: 16377 - K02515 HSL1 serine/threonine-protein kinase HSL1, negative regulator of Swe1 kinase, at 204199 to 205713 16377 mRNA_8010: 16378 - K15414 C1QBP complement component 1 Q subcomponent-binding protein, mitochondrial, at 206291 to 207434 16378 mRNA_8011: 16379 - K09537 DNAJC17 DnaJ homolog subfamily C member 17, at 207819 to 208967 16379 mRNA_8012: 16380 - HMMPfam-RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)-PF00076,HMMPfam-RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)-PF14259,ProSiteProfiles-Eukaryotic RNA Recognition Motif (RRM) profile.-PS50102,SMART-RNA recognition motif-SM00360,SUPERFAMILY--SSF54928, at 209272 to 211609 16380 mRNA_8013: 16381 - SUPERFAMILY--SSF58113, at 212070 to 213325 16381
Group Condition mRNA_8009 mRNA_8010 mRNA_8011 mRNA_8012 mRNA_8013
16377
16378
16379
16380
16381
facs on lipid accumulation Sorted High BODIPY Gate   -0.9 -0.3 -0.3 -1.5
buoyancy on lipid accumulation 40 hrs Median Buoyancy   -2.0 1.9 -0.2 -1.1
growth on ricinoleic acid YNB Ricinoleic Acid   -1.7 0.1 0.2 0.2
facs on lipid accumulation Sorted No BODIPY Gate   -0.6 -0.4 -0.3 0.4
growth on ricinoleic acid YNB Methylricinoleic Acid   -1.4 0.2 0.4 0.3
growth on oleic acid YNB Oleic Acid   -1.1 0.1 0.5 0.1
ypd buoyancy 40 hrs High Buoyancy   0.5 -0.3 -0.3 -0.3
growth on oleic acid YNB Glucose   -0.4 -0.4 0.5 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy   -1.0 2.0 -0.3 -0.9
auxotrophy YNB Glucose 75mM Arginine   -0.1 -0.4 -0.0 0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   -1.1 2.2 -0.2 -0.7
facs on lipid accumulation Sorted Low BODIPY Gate   -1.0 -1.8 0.4 2.8
ypd buoyancy 40 hrs No Buoyancy Separation   0.3 0.5 0.1 -0.6
auxotrophy YNB Glucose   -0.2 0.2 0.2 0.4
growth on ricinoleic acid YNB Glucose   -0.7 1.0 0.3 0.1
ypd buoyancy 40 hrs Low Buoyancy   0.8 0.3 -0.1 -0.2
auxotrophy YNB Glucose 75mM Methionine   0.4 -0.6 0.2 1.0
growth on ypd YPD   0.2 0.5 0.2 0.1
ypd buoyancy 40 hrs Median Buoyancy   1.4 -0.1 -0.0 -0.3
auxotrophy Dropout Complete   0.5 -0.3 0.2 0.7
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.6 2.1 0.0 0.8
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