Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7986: 16354 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 151105 to 154451 16354 mRNA_7987: 16355 - SUPERFAMILY--SSF144232, at 155023 to 156185 16355 mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156478 to 157308 16356 mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694 16357 mRNA_7990: 16358 - Hypothetical Protein, at 159249 to 159873 16358
Group Condition mRNA_7986 mRNA_7987 mRNA_7988 mRNA_7989 mRNA_7990
16354
16355
16356
16357
16358
ypd buoyancy 40 hrs No Buoyancy Separation 0.0 0.2 -0.4 -1.5 -1.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 0.2 0.0 -0.0 -1.9
facs on lipid accumulation Sorted High BODIPY Gate -0.0 -0.1 -0.2 0.6 -1.6
auxotrophy Dropout Complete -0.0 0.2 -0.5 -0.2 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid -0.4 -0.1 0.1 -0.9 0.2
auxotrophy YNB Glucose 0.1 0.1 -0.3 0.1 -0.9
growth on oleic acid YNB Glucose 0.1 0.1 0.0 -0.2 -0.7
auxotrophy YNB Glucose 75mM Arginine -0.0 0.1 0.0 -0.2 -0.5
facs on lipid accumulation Sorted No BODIPY Gate 0.1 0.3 0.0 0.7 -1.4
growth on ricinoleic acid YNB Methylricinoleic Acid -0.0 -0.2 0.1 -0.4 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.1 0.1 -0.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.1 -0.3 -0.1 0.9 -0.2
auxotrophy YNB Glucose 75mM Methionine 0.3 0.1 -0.2 -0.1 0.1
growth on ricinoleic acid YNB Glucose 0.1 -0.3 0.3 -0.3 0.6
growth on oleic acid YNB Oleic Acid 0.4 0.2 0.2 -0.3 -0.0
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 -0.3 -0.1 0.7 0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 -0.6 0.3 0.8 0.1
ypd buoyancy 40 hrs Median Buoyancy 0.0 0.2 0.2 0.1 0.2
growth on ypd YPD -0.0 0.3 0.1 0.0 0.5
ypd buoyancy 40 hrs High Buoyancy 0.0 0.2 0.0 0.4 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.0 -0.2 -0.1 1.1 0.1
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