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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7985: 16353 - K15440 TAD1, ADAT1 tRNA-specific adenosine deaminase 1, at 149093 to 150954
16353
mRNA_7986: 16354 - ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 151105 to 154451
16354
mRNA_7987: 16355 - SUPERFAMILY--SSF144232, at 155023 to 156185
16355
mRNA_7988: 16356 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 156478 to 157308
16356
mRNA_7989: 16357 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 157953 to 158694
16357
Group
Condition
mRNA_7985
mRNA_7986
mRNA_7987
mRNA_7988
mRNA_7989
16353
16354
16355
16356
16357
ypd buoyancy
40 hrs No Buoyancy Separation
-0.0
0.0
0.2
-0.4
-1.5
growth on ricinoleic acid
YNB Ricinoleic Acid
0.1
-0.4
-0.1
0.1
-0.9
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.5
-0.2
0.2
0.0
-0.0
auxotrophy
Dropout Complete
0.1
-0.0
0.2
-0.5
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
-0.0
-0.1
-0.2
0.6
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.4
-0.0
-0.2
0.1
-0.4
growth on ricinoleic acid
YNB Glucose
0.1
0.1
-0.3
0.3
-0.3
auxotrophy
YNB Glucose 75mM Arginine
0.2
-0.0
0.1
0.0
-0.2
growth on oleic acid
YNB Glucose
0.2
0.1
0.1
0.0
-0.2
ypd buoyancy
40 hrs Low Buoyancy
0.1
-0.0
0.1
0.1
-0.1
auxotrophy
YNB Glucose
0.2
0.1
0.1
-0.3
0.1
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.3
0.1
-0.2
-0.1
growth on oleic acid
YNB Oleic Acid
-0.1
0.4
0.2
0.2
-0.3
ypd buoyancy
40 hrs High Buoyancy
-0.3
0.0
0.2
0.0
0.4
buoyancy on lipid accumulation
40 hrs Low Buoyancy
0.2
-0.1
-0.3
-0.1
0.9
ypd buoyancy
40 hrs Median Buoyancy
-0.1
0.0
0.2
0.2
0.1
growth on ypd
YPD
0.4
-0.0
0.3
0.1
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
0.1
0.3
0.0
0.7
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.4
0.1
-0.6
0.3
0.8
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.6
0.1
-0.3
-0.1
0.7
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
0.3
0.0
-0.2
-0.1
1.1
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