Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7961: 16329 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 104119 to 104997 16329 mRNA_7962: 16330 - K08967 mtnD, mtnZ, ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, at 105517 to 106511 16330 mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106769 to 107651 16331 mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108075 to 108950 16332 mRNA_7965: 16333 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 109378 to 110240 16333
Group Condition mRNA_7961 mRNA_7962 mRNA_7963 mRNA_7964 mRNA_7965
16329
16330
16331
16332
16333
ypd buoyancy 40 hrs No Buoyancy Separation -0.3 -0.7 -2.2 0.1 -0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.0 -0.2 -0.5 -0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.2 -0.1 -0.2 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.1 -0.1 -0.1 -0.2 0.0
ypd buoyancy 40 hrs Median Buoyancy -0.1 0.1 -0.3 0.0 0.1
ypd buoyancy 40 hrs High Buoyancy 0.1 0.2 -0.2 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.1 0.2 0.0 -0.1 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.1 0.1 0.2 -0.0 -0.1
growth on oleic acid YNB Oleic Acid 0.1 0.1 0.0 -0.0 -0.1
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.2 0.1 0.2 0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.2 0.2 -0.0 0.2
auxotrophy Dropout Complete -0.1 0.3 -0.1 0.0 0.3
ypd buoyancy 40 hrs Low Buoyancy 0.1 0.4 -0.1 0.2 -0.1
auxotrophy YNB Glucose -0.1 0.2 0.1 -0.0 0.3
growth on ricinoleic acid YNB Glucose 0.1 0.1 -0.3 0.2 0.4
growth on oleic acid YNB Glucose 0.1 0.1 0.2 0.1 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 -0.1 0.1 0.1 0.5
auxotrophy YNB Glucose 75mM Methionine 0.3 0.2 0.1 -0.1 0.3
facs on lipid accumulation Sorted High BODIPY Gate 0.4 -0.0 0.2 0.0 0.2
growth on ypd YPD 0.1 0.4 0.6 0.0 -0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.8 0.4 0.1 -0.2 0.4
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