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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7960: 16328 - SUPERFAMILY--SSF144232, at 102805 to 103919
16328
mRNA_7961: 16329 - HMMPfam-Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family-PF10342, at 104119 to 104997
16329
mRNA_7962: 16330 - K08967 mtnD, mtnZ, ADI1 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase, at 105517 to 106511
16330
mRNA_7963: 16331 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 106769 to 107651
16331
mRNA_7964: 16332 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 108075 to 108950
16332
Group
Condition
mRNA_7960
mRNA_7961
mRNA_7962
mRNA_7963
mRNA_7964
16328
16329
16330
16331
16332
ypd buoyancy
40 hrs No Buoyancy Separation
-0.3
-0.3
-0.7
-2.2
0.1
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.2
-0.2
0.0
-0.2
-0.5
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
-0.2
-0.1
-0.2
-0.1
ypd buoyancy
40 hrs Median Buoyancy
0.0
-0.1
0.1
-0.3
0.0
auxotrophy
YNB Glucose 75mM Arginine
0.1
0.1
-0.1
-0.1
-0.2
ypd buoyancy
40 hrs High Buoyancy
0.0
0.1
0.2
-0.2
-0.1
growth on ricinoleic acid
YNB Glucose
-0.1
0.1
0.1
-0.3
0.2
buoyancy on lipid accumulation
40 hrs Median Buoyancy
-0.0
-0.1
0.2
0.0
-0.1
facs on lipid accumulation
Sorted High BODIPY Gate
-0.5
0.4
-0.0
0.2
0.0
facs on lipid accumulation
Sorted No BODIPY Gate
0.1
0.0
-0.2
0.1
0.2
facs on lipid accumulation
Sorted Low BODIPY Gate
0.1
0.2
-0.2
0.2
-0.0
auxotrophy
YNB Glucose
0.1
-0.1
0.2
0.1
-0.0
auxotrophy
Dropout Complete
0.1
-0.1
0.3
-0.1
0.0
growth on oleic acid
YNB Glucose
-0.1
0.1
0.1
0.2
0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.0
0.2
-0.1
0.1
0.1
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
0.1
0.1
0.2
-0.0
growth on oleic acid
YNB Oleic Acid
0.3
0.1
0.1
0.0
-0.0
ypd buoyancy
40 hrs Low Buoyancy
0.2
0.1
0.4
-0.1
0.2
auxotrophy
YNB Glucose 75mM Methionine
0.3
0.3
0.2
0.1
-0.1
growth on ypd
YPD
0.2
0.1
0.4
0.6
0.0
growth on ricinoleic acid
YNB Methylricinoleic Acid
0.2
0.8
0.4
0.1
-0.2
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