Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7948: 16316 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 74444 to 75195 16316 mRNA_7949: 16317 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 75609 to 76482 16317 mRNA_7950: 16318 - K04802 PCNA proliferating cell nuclear antigen, at 76989 to 79257 16318 mRNA_7951: 16319 - K09527 DNAJC7 DnaJ homolog subfamily C member 7, at 79808 to 82314 16319 mRNA_7952: 16320 - KOG0627 Heat shock transcription factor, at 82566 to 84687 16320
Group Condition mRNA_7948 mRNA_7949 mRNA_7950 mRNA_7951 mRNA_7952
16316
16317
16318
16319
16320
facs on lipid accumulation Sorted Low BODIPY Gate -0.2 -0.2 -1.5 0.1 0.1
auxotrophy YNB Glucose 75mM Methionine -0.4 -0.3 -0.3 0.2 -0.2
auxotrophy Dropout Complete -0.0 -0.2 -0.3 0.0 -0.3
facs on lipid accumulation Sorted No BODIPY Gate -0.4 0.2 -0.9 0.3 0.1
growth on oleic acid YNB Glucose -0.9 0.2 -0.2 -0.1 0.2
auxotrophy YNB Glucose 75mM Arginine -0.2 -0.1 -0.3 0.1 -0.3
auxotrophy YNB Glucose -0.5 -0.3 0.4 0.3 -0.6
facs on lipid accumulation Sorted High BODIPY Gate 0.2 -0.1 -0.3 0.2 -0.3
ypd buoyancy 40 hrs High Buoyancy -0.5 0.1 0.0 0.1 0.1
growth on ricinoleic acid YNB Glucose 0.7 0.3 -1.0 -0.0 -0.0
ypd buoyancy 40 hrs Low Buoyancy 0.5 0.1 -0.1 -0.3 0.0
ypd buoyancy 40 hrs Median Buoyancy 0.0 -0.2 0.5 0.0 -0.0
growth on ypd YPD -0.5 0.1 0.1 0.6 0.1
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.2 0.5 -0.1 -0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.2 0.5 0.0 -0.1
growth on oleic acid YNB Oleic Acid 0.6 0.3 -0.1 0.1 0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.8 0.0 0.5 0.3 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 1.3 0.1 0.3 0.3 -0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.8 -0.1 2.4 -0.9 -0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 1.2 0.2 0.5 0.6 -0.2
buoyancy on lipid accumulation 40 hrs High Buoyancy 1.1 0.1 1.2 0.3 -0.0
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