Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7942: 16310 - K12824 TCERG1, CA150 transcription elongation regulator 1, at 62103 to 65141 16310 mRNA_7943: 16311 - HMMPfam-Fungal Zn(2)-Cys(6) binuclear cluster domain-PF00172,ProSitePatterns-Zn(2)-C6 fungal-type DNA-binding domain signature.-PS00463,ProSiteProfiles-Zn(2)-C6 fungal-type DNA-binding domain profile.-PS50048,SMART-GAL4-like Zn(II)2Cys6 (or C6 zinc) binuclear cluster DNA-binding domain-SM00066,SUPERFAMILY--SSF57701, at 65547 to 69135 16311 mRNA_7944: 16312 - Hypothetical Protein, at 69518 to 70390 16312 mRNA_7945: 16313 - HMMPfam-MYND finger-PF01753,ProSiteProfiles-Zinc finger MYND-type profile.-PS50865,SUPERFAMILY--SSF144232, at 70630 to 71509 16313 mRNA_7946: 16314 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 71933 to 72812 16314
Group Condition mRNA_7942 mRNA_7943 mRNA_7944 mRNA_7945 mRNA_7946
16310
16311
16312
16313
16314
ypd buoyancy 40 hrs No Buoyancy Separation -0.2 -0.7 -0.4 -1.1 -0.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.5 -0.0 0.2 -0.2 -0.1
ypd buoyancy 40 hrs High Buoyancy -0.4 -0.1 0.1 -0.0 -0.2
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1 0.0 -0.3 -0.3
facs on lipid accumulation Sorted High BODIPY Gate -0.2 -0.2 -0.2 0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.6 0.2 0.3 -0.1 0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.0 -0.4 0.2 -0.2 0.2
ypd buoyancy 40 hrs Low Buoyancy -0.0 0.1 0.1 -0.0 -0.1
growth on ricinoleic acid YNB Ricinoleic Acid -0.1 0.2 -0.1 -0.1 0.1
auxotrophy YNB Glucose 75mM Arginine 0.3 -0.5 0.2 0.2 0.0
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.7 0.2 0.8 -0.3 0.3
auxotrophy YNB Glucose 0.1 -0.3 0.3 0.2 0.1
growth on ricinoleic acid YNB Glucose 0.1 0.1 0.1 0.3 -0.3
growth on ypd YPD -0.5 0.0 0.2 0.4 0.3
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.3 0.0 0.7 0.0 0.0
auxotrophy YNB Glucose 75mM Methionine 0.2 -0.2 0.1 0.4 0.1
auxotrophy Dropout Complete 0.2 -0.4 0.5 0.4 -0.1
facs on lipid accumulation Sorted Low BODIPY Gate 0.2 -0.1 0.2 -0.1 0.5
growth on oleic acid YNB Oleic Acid -0.0 0.2 0.3 0.2 0.1
growth on oleic acid YNB Glucose 0.2 0.1 0.2 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid 0.2 0.2 0.5 0.3 0.1
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