Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7917: 16285 - K18477 RMT2 type IV protein arginine methyltransferase, at 16350 to 18077 16285 mRNA_7918: 16286 - K15523 FN3KRP protein-ribulosamine 3-kinase, at 18272 to 19315 16286 mRNA_7919: 16287 - K01489 cdd, CDA cytidine deaminase, at 22432 to 23509 16287 mRNA_7920: 16288 - K02219 CKS1 cyclin-dependent kinase regulatory subunit CKS1, at 24120 to 24922 16288 mRNA_7921: 16289 - KOG3022 Predicted ATPase, nucleotide-binding, at 25144 to 26524 16289
Group Condition mRNA_7917 mRNA_7918 mRNA_7919 mRNA_7920 mRNA_7921
16285
16286
16287
16288
16289
facs on lipid accumulation Sorted High BODIPY Gate -0.4 -0.2 -1.5 0.1 -0.5
growth on ricinoleic acid YNB Glucose -0.3 -0.1 -0.4 -0.0 -1.3
auxotrophy YNB Glucose -0.3 -0.3 -0.7 0.1 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation -2.4 -0.1 0.4 0.3 0.1
growth on ricinoleic acid YNB Methylricinoleic Acid -0.2 0.3 -0.3 -0.0 -0.7
auxotrophy Dropout Complete -0.1 0.1 -0.0 0.4 -1.4
growth on oleic acid YNB Oleic Acid -0.2 0.5 -0.4 0.0 -0.8
growth on ricinoleic acid YNB Ricinoleic Acid 0.2 0.5 -0.3 0.1 -1.1
auxotrophy YNB Glucose 75mM Methionine 0.1 -0.2 -0.6 0.2 0.1
facs on lipid accumulation Sorted No BODIPY Gate -0.1 0.0 0.3 0.3 -1.0
auxotrophy YNB Glucose 75mM Arginine 0.2 -0.3 -0.4 0.3 -0.3
growth on oleic acid YNB Glucose 0.3 0.4 -0.3 -0.3 -0.0
ypd buoyancy 40 hrs Median Buoyancy -0.2 0.1 0.2 0.2 -0.1
ypd buoyancy 40 hrs Low Buoyancy -0.0 -0.1 0.1 0.5 -0.2
ypd buoyancy 40 hrs High Buoyancy -0.3 0.2 0.0 0.4 0.0
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.3 0.6 0.0 0.0 0.7
facs on lipid accumulation Sorted Low BODIPY Gate -0.6 0.0 0.8 0.7 0.9
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.2 0.3 0.5 -0.1 1.2
growth on ypd YPD 0.1 -0.1 0.1 0.7 1.4
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2 0.5 0.2 0.4 1.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3 0.1 0.5 0.2 1.9
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