Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7912: 16280 - K11434 PRMT1 type I protein arginine methyltransferase, at 3147 to 4682 16280 mRNA_7913: 16281 - K00234 SDHA, SDH1 succinate dehydrogenase (ubiquinone) flavoprotein subunit, at 4859 to 7568 16281 mRNA_7914: 16282 - K10684 UBLE1A, SAE1 ubiquitin-like 1-activating enzyme E1 A, at 8793 to 10247 16282 mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283 mRNA_7916: 16284 - K08683 HSD17B10 3-hydroxyacyl-CoA dehydrogenase / 3-hydroxy-2-methylbutyryl-CoA dehydrogenase, at 14684 to 15975 16284
Group Condition mRNA_7912 mRNA_7913 mRNA_7914 mRNA_7915 mRNA_7916
16280
16281
16282
16283
16284
facs on lipid accumulation Sorted High BODIPY Gate -3.6     0.1 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate -2.5     0.1 -0.8
auxotrophy YNB Glucose 75mM Methionine -2.4     -0.2 -0.4
auxotrophy YNB Glucose -1.8     -0.2 -0.8
auxotrophy YNB Glucose 75mM Arginine -1.7     -0.4 -0.6
facs on lipid accumulation Sorted No BODIPY Gate -1.6     0.0 -0.1
auxotrophy Dropout Complete -1.3     0.1 -0.3
growth on oleic acid YNB Glucose -0.7     -0.1 -0.2
growth on oleic acid YNB Oleic Acid -0.6     -0.5 0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.2     -0.1 -1.0
growth on ricinoleic acid YNB Ricinoleic Acid -1.3     0.5 0.3
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.3     -0.4 -0.4
growth on ricinoleic acid YNB Glucose 0.0     0.2 -0.3
growth on ypd YPD 0.9     0.1 -0.8
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.6     -0.9 0.6
ypd buoyancy 40 hrs Low Buoyancy 0.0     0.0 0.3
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1     0.5 0.1
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.7     -0.0 -0.0
ypd buoyancy 40 hrs High Buoyancy 1.4     -0.1 0.4
ypd buoyancy 40 hrs Median Buoyancy 1.2     0.1 0.6
ypd buoyancy 40 hrs No Buoyancy Separation 2.3     0.4 0.8
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