Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7911: 16279 - K03015 RPB7, POLR2G DNA-directed RNA polymerase II subunit RPB7, at 1441 to 2386 16279 mRNA_7912: 16280 - K11434 PRMT1 type I protein arginine methyltransferase, at 3147 to 4682 16280 mRNA_7913: 16281 - K00234 SDHA, SDH1 succinate dehydrogenase (ubiquinone) flavoprotein subunit, at 4859 to 7568 16281 mRNA_7914: 16282 - K10684 UBLE1A, SAE1 ubiquitin-like 1-activating enzyme E1 A, at 8793 to 10247 16282 mRNA_7915: 16283 - SUPERFAMILY--SSF51445, at 12129 to 14300 16283
Group Condition mRNA_7911 mRNA_7912 mRNA_7913 mRNA_7914 mRNA_7915
16279
16280
16281
16282
16283
facs on lipid accumulation Sorted High BODIPY Gate   -3.6     0.1
auxotrophy YNB Glucose 75mM Methionine   -2.4     -0.2
facs on lipid accumulation Sorted Low BODIPY Gate   -2.5     0.1
auxotrophy YNB Glucose 75mM Arginine   -1.7     -0.4
auxotrophy YNB Glucose   -1.8     -0.2
facs on lipid accumulation Sorted No BODIPY Gate   -1.6     0.0
auxotrophy Dropout Complete   -1.3     0.1
growth on oleic acid YNB Oleic Acid   -0.6     -0.5
growth on oleic acid YNB Glucose   -0.7     -0.1
growth on ricinoleic acid YNB Ricinoleic Acid   -1.3     0.5
buoyancy on lipid accumulation 40 hrs High Buoyancy   0.6     -0.9
buoyancy on lipid accumulation 40 hrs Median Buoyancy   0.3     -0.4
ypd buoyancy 40 hrs Low Buoyancy   0.0     0.0
buoyancy on lipid accumulation 40 hrs Low Buoyancy   0.2     -0.1
growth on ricinoleic acid YNB Glucose   0.0     0.2
growth on ricinoleic acid YNB Methylricinoleic Acid   -0.1     0.5
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation   0.7     -0.0
growth on ypd YPD   0.9     0.1
ypd buoyancy 40 hrs Median Buoyancy   1.2     0.1
ypd buoyancy 40 hrs High Buoyancy   1.4     -0.1
ypd buoyancy 40 hrs No Buoyancy Separation   2.3     0.4
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