Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7900: 16268 - Hypothetical Protein, at 1332070 to 1333846 16268 mRNA_7901: 16269 - KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation), at 1335118 to 1336063 16269 mRNA_7902: 16270 - K13348 MPV17 protein Mpv17, at 1338416 to 1339607 16270 mRNA_7903: 16271 - K14810 DDX56, DBP9 ATP-dependent RNA helicase DDX56/DBP9, at 1339819 to 1342318 16271 mRNA_7904: 16272 - Hypothetical Protein, at 1342830 to 1343789 16272
Group Condition mRNA_7900 mRNA_7901 mRNA_7902 mRNA_7903 mRNA_7904
16268
16269
16270
16271
16272
ypd buoyancy 40 hrs No Buoyancy Separation -0.4 -0.6 -0.1   0.2
growth on ypd YPD 0.5 -0.0 -0.5   -0.3
ypd buoyancy 40 hrs Low Buoyancy 0.2 -0.2 -0.3   0.0
facs on lipid accumulation Sorted No BODIPY Gate 0.3 -0.0 0.2   -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.2 -0.0   0.2
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 -0.2 0.6   0.2
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1 0.6 -0.2   0.3
ypd buoyancy 40 hrs High Buoyancy -0.0 0.4 0.0   0.4
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1 0.9 -0.4   0.4
growth on ricinoleic acid YNB Glucose -0.1 1.2 -0.3   0.3
growth on oleic acid YNB Oleic Acid 0.4 0.4 0.1   0.3
auxotrophy Dropout Complete 0.8 0.2 0.3   -0.1
auxotrophy YNB Glucose 75mM Methionine 0.9 -0.3 0.4   0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.4 1.1 -0.2   0.2
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.5 0.8 0.0   0.1
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.7 0.7 0.1   0.1
auxotrophy YNB Glucose 75mM Arginine 1.3 -0.2 0.3   0.0
growth on ricinoleic acid YNB Ricinoleic Acid 0.5 0.9 0.1   0.0
growth on oleic acid YNB Glucose 0.2 1.3 -0.0   0.4
facs on lipid accumulation Sorted High BODIPY Gate 0.3 1.2 0.4   0.3
auxotrophy YNB Glucose 1.3 0.3 0.5   0.3
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