Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1328005 to 1329095 16266 mRNA_7899: 16267 - K00618 E2.3.1.1 amino-acid N-acetyltransferase, at 1329365 to 1331583 16267 mRNA_7900: 16268 - Hypothetical Protein, at 1332070 to 1333846 16268 mRNA_7901: 16269 - KOG1605 TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation), at 1335118 to 1336063 16269 mRNA_7902: 16270 - K13348 MPV17 protein Mpv17, at 1338416 to 1339607 16270
Group Condition mRNA_7898 mRNA_7899 mRNA_7900 mRNA_7901 mRNA_7902
16266
16267
16268
16269
16270
growth on ricinoleic acid YNB Methylricinoleic Acid -0.9 -1.7 0.1 0.6 -0.2
facs on lipid accumulation Sorted Low BODIPY Gate 0.0 -1.8 -0.0 -0.2 0.6
growth on oleic acid YNB Oleic Acid -0.3 -1.8 0.4 0.4 0.1
auxotrophy YNB Glucose 75mM Methionine -0.1 -2.1 0.9 -0.3 0.4
facs on lipid accumulation Sorted No BODIPY Gate 0.1 -1.7 0.3 -0.0 0.2
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.5 -1.1 0.1 0.9 -0.4
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.4 -1.9 0.5 0.8 0.0
growth on ricinoleic acid YNB Glucose -0.5 -1.1 -0.1 1.2 -0.3
buoyancy on lipid accumulation 40 hrs Low Buoyancy -0.7 -1.5 0.7 0.7 0.1
growth on ypd YPD -0.5 -0.1 0.5 -0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.3 0.2 -0.2 -0.3
growth on oleic acid YNB Glucose -0.0 -2.1 0.2 1.3 -0.0
growth on ricinoleic acid YNB Ricinoleic Acid -0.6 -1.6 0.5 0.9 0.1
ypd buoyancy 40 hrs No Buoyancy Separation 0.2 0.3 -0.4 -0.6 -0.1
ypd buoyancy 40 hrs Median Buoyancy -0.0 -0.5 -0.0 0.2 -0.0
ypd buoyancy 40 hrs High Buoyancy -0.2 -0.1 -0.0 0.4 0.0
auxotrophy YNB Glucose 0.1 -2.1 1.3 0.3 0.5
facs on lipid accumulation Sorted High BODIPY Gate 0.5 -2.1 0.3 1.2 0.4
auxotrophy Dropout Complete -0.6 -0.3 0.8 0.2 0.3
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.5 0.4 1.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0 -0.3 1.3 -0.2 0.3
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