Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7894: 16262 - HMMPfam-Eisosome component PIL1-PF13805, at 1318787 to 1321877 16262 mRNA_7895: 16263 - KOG0027 Calmodulin and related proteins (EF-Hand superfamily), at 1323033 to 1324122 16263 mRNA_7896: 16264 - K01783 rpe, RPE ribulose-phosphate 3-epimerase, at 1324281 to 1325324 16264 mRNA_7897: 16265 - K10872 DMC1 meiotic recombination protein DMC1, at 1325676 to 1327786 16265 mRNA_7898: 16266 - K12660 rhmA 2-dehydro-3-deoxy-L-rhamnonate aldolase, at 1328005 to 1329095 16266
Group Condition mRNA_7894 mRNA_7895 mRNA_7896 mRNA_7897 mRNA_7898
16262
16263
16264
16265
16266
growth on ricinoleic acid YNB Glucose -0.0     -0.1 -0.5
growth on ricinoleic acid YNB Methylricinoleic Acid 0.1     0.1 -0.9
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3     -0.2 -0.7
growth on ypd YPD 0.1     -0.1 -0.5
auxotrophy Dropout Complete -0.0     0.1 -0.6
growth on ricinoleic acid YNB Ricinoleic Acid 0.1     0.1 -0.6
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation 0.1     0.0 -0.5
ypd buoyancy 40 hrs Low Buoyancy 0.1     -0.1 -0.1
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.2     0.2 -0.4
ypd buoyancy 40 hrs No Buoyancy Separation 0.1     -0.2 0.2
ypd buoyancy 40 hrs High Buoyancy 0.2     0.1 -0.2
auxotrophy YNB Glucose 75mM Arginine -0.0     0.1 -0.0
facs on lipid accumulation Sorted No BODIPY Gate -0.1     0.1 0.1
growth on oleic acid YNB Oleic Acid 0.2     0.3 -0.3
ypd buoyancy 40 hrs Median Buoyancy 0.1     0.1 -0.0
auxotrophy YNB Glucose 0.1     0.0 0.1
auxotrophy YNB Glucose 75mM Methionine 0.1     0.3 -0.1
buoyancy on lipid accumulation 40 hrs High Buoyancy 0.3     0.2 -0.1
growth on oleic acid YNB Glucose 0.2     0.2 -0.0
facs on lipid accumulation Sorted Low BODIPY Gate 0.3     0.1 0.0
facs on lipid accumulation Sorted High BODIPY Gate 0.2     0.1 0.5
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