Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7885: 16253 - KOG0137 Very-long-chain acyl-CoA dehydrogenase, at 1298396 to 1300627 16253 mRNA_7886: 16254 - KOG2913 Predicted membrane protein, at 1300856 to 1302140 16254 mRNA_7887: 16255 - HMMPfam-Uncharacterized conserved protein (DUF2183)-PF09949, at 1302822 to 1306124 16255 mRNA_7888: 16256 - K12274 SEC72 translocation protein SEC72, at 1306331 to 1307074 16256 mRNA_7889: 16257 - Hypothetical Protein, at 1307542 to 1308171 16257
Group Condition mRNA_7885 mRNA_7886 mRNA_7887 mRNA_7888 mRNA_7889
16253
16254
16255
16256
16257
ypd buoyancy 40 hrs Low Buoyancy -0.1 -0.1 -0.2    
growth on oleic acid YNB Oleic Acid -0.3 -0.1 0.0    
facs on lipid accumulation Sorted No BODIPY Gate -0.3 -0.1 -0.0    
growth on oleic acid YNB Glucose -0.2 -0.1 0.1    
growth on ricinoleic acid YNB Glucose -0.3 -0.0 0.1    
ypd buoyancy 40 hrs High Buoyancy 0.1 -0.1 -0.2    
auxotrophy Dropout Complete -0.2 0.1 -0.0    
ypd buoyancy 40 hrs Median Buoyancy -0.0 0.1 -0.2    
auxotrophy YNB Glucose 75mM Methionine -0.2 0.2 -0.1    
auxotrophy YNB Glucose -0.2 0.2 0.1    
growth on ricinoleic acid YNB Methylricinoleic Acid -0.3 0.1 0.2    
auxotrophy YNB Glucose 75mM Arginine -0.4 0.2 0.2    
growth on ypd YPD 0.1 -0.3 0.2    
ypd buoyancy 40 hrs No Buoyancy Separation -0.0 -0.1 0.2    
growth on ricinoleic acid YNB Ricinoleic Acid -0.2 0.2 0.1    
buoyancy on lipid accumulation 40 hrs Median Buoyancy -0.3 0.3 0.2    
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.0 0.1 0.1    
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.1 0.3 0.1    
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.0 0.2 0.1    
facs on lipid accumulation Sorted Low BODIPY Gate -0.0 0.1 0.3    
facs on lipid accumulation Sorted High BODIPY Gate 0.0 0.0 0.4    
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