Fitness for 5 genes in Rhodosporidium toruloides IFO0880

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Top 21 experiments (either direction), sorted by average fitness

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500 nt mRNA_7876: 16244 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1278407 to 1280463 16244 mRNA_7877: 16245 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 1280772 to 1282226 16245 mRNA_7878: 16246 - K14400 PCF11 pre-mRNA cleavage complex 2 protein Pcf11, at 1282448 to 1285814 16246 mRNA_7879: 16247 - Hypothetical Protein, at 1285820 to 1286086 16247 mRNA_7880: 16248 - K02940 RP-L9e, RPL9 large subunit ribosomal protein L9e, at 1286203 to 1287208 16248
Group Condition mRNA_7876 mRNA_7877 mRNA_7878 mRNA_7879 mRNA_7880
16244
16245
16246
16247
16248
ypd buoyancy 40 hrs No Buoyancy Separation -1.4 -1.1      
facs on lipid accumulation Sorted No BODIPY Gate -0.2 -0.2      
growth on ricinoleic acid YNB Methylricinoleic Acid -0.1 -0.2      
facs on lipid accumulation Sorted High BODIPY Gate 0.1 -0.4      
buoyancy on lipid accumulation 40 hrs High Buoyancy -0.1 -0.1      
ypd buoyancy 40 hrs Low Buoyancy 0.1 -0.2      
growth on ricinoleic acid YNB Glucose 0.1 -0.1      
growth on ricinoleic acid YNB Ricinoleic Acid 0.1 -0.1      
growth on oleic acid YNB Oleic Acid 0.3 -0.3      
ypd buoyancy 40 hrs High Buoyancy 0.2 -0.1      
growth on oleic acid YNB Glucose 0.2 -0.1      
growth on ypd YPD -0.3 0.5      
ypd buoyancy 40 hrs Median Buoyancy 0.2 0.2      
buoyancy on lipid accumulation 40 hrs Median Buoyancy 0.1 0.3      
auxotrophy YNB Glucose 0.6 -0.1      
buoyancy on lipid accumulation 40 hrs Low Buoyancy 0.3 0.1      
buoyancy on lipid accumulation 40 hrs No Buoyancy Separation -0.2 0.7      
auxotrophy Dropout Complete 0.6 -0.0      
facs on lipid accumulation Sorted Low BODIPY Gate 0.5 0.1      
auxotrophy YNB Glucose 75mM Methionine 0.6 0.1      
auxotrophy YNB Glucose 75mM Arginine 0.5 0.2      
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