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Protein
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Fitness for 5 genes in
Rhodosporidium toruloides IFO0880
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Top 21 experiments (either direction), sorted by average fitness
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all 21 experiments
500 nt
mRNA_7875: 16243 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1276144 to 1278283
16243
mRNA_7876: 16244 - HMMPfam-Protein of unknown function (DUF4246)-PF14033, at 1278407 to 1280463
16244
mRNA_7877: 16245 - KOG1575 Voltage-gated shaker-like K+ channel, subunit beta/KCNAB, at 1280772 to 1282226
16245
mRNA_7878: 16246 - K14400 PCF11 pre-mRNA cleavage complex 2 protein Pcf11, at 1282448 to 1285814
16246
mRNA_7879: 16247 - Hypothetical Protein, at 1285820 to 1286086
16247
Group
Condition
mRNA_7875
mRNA_7876
mRNA_7877
mRNA_7878
mRNA_7879
16243
16244
16245
16246
16247
ypd buoyancy
40 hrs No Buoyancy Separation
0.1
-1.4
-1.1
facs on lipid accumulation
Sorted No BODIPY Gate
-0.2
-0.2
-0.2
facs on lipid accumulation
Sorted High BODIPY Gate
-0.2
0.1
-0.4
growth on ricinoleic acid
YNB Methylricinoleic Acid
-0.1
-0.1
-0.2
growth on oleic acid
YNB Oleic Acid
-0.2
0.3
-0.3
buoyancy on lipid accumulation
40 hrs High Buoyancy
0.0
-0.1
-0.1
ypd buoyancy
40 hrs Low Buoyancy
0.1
0.1
-0.2
growth on oleic acid
YNB Glucose
-0.1
0.2
-0.1
growth on ypd
YPD
-0.2
-0.3
0.5
growth on ricinoleic acid
YNB Glucose
0.1
0.1
-0.1
ypd buoyancy
40 hrs High Buoyancy
0.1
0.2
-0.1
auxotrophy
YNB Glucose
-0.2
0.6
-0.1
growth on ricinoleic acid
YNB Ricinoleic Acid
0.3
0.1
-0.1
buoyancy on lipid accumulation
40 hrs Low Buoyancy
-0.1
0.3
0.1
auxotrophy
Dropout Complete
-0.2
0.6
-0.0
buoyancy on lipid accumulation
40 hrs No Buoyancy Separation
-0.0
-0.2
0.7
buoyancy on lipid accumulation
40 hrs Median Buoyancy
0.1
0.1
0.3
facs on lipid accumulation
Sorted Low BODIPY Gate
-0.0
0.5
0.1
auxotrophy
YNB Glucose 75mM Arginine
-0.2
0.5
0.2
auxotrophy
YNB Glucose 75mM Methionine
-0.0
0.6
0.1
ypd buoyancy
40 hrs Median Buoyancy
0.2
0.2
0.2
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